[med-svn] [bcl2fastq2] 01/01: Does not build under Jessie with boost 1.55 - drop a note for the moment
Andreas Tille
tille at debian.org
Tue Aug 22 13:21:02 UTC 2017
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commit 46b87ee6eb44b74f534a5cebcabe448151f95020
Author: Andreas Tille <tille at debian.org>
Date: Tue Aug 22 15:20:21 2017 +0200
Does not build under Jessie with boost 1.55 - drop a note for the moment
---
debian/README.backports | 13 +++++++++++++
1 file changed, 13 insertions(+)
diff --git a/debian/README.backports b/debian/README.backports
new file mode 100644
index 0000000..5dca3f9
--- /dev/null
+++ b/debian/README.backports
@@ -0,0 +1,13 @@
+I've found an issue when trying to backport bcl2fastq to Jessie featuring
+boost 1.55:
+
+cd /build/bcl2fastq2-2.19.1.403/bcl2fastq-build/cxx/lib/io && /usr/bin/g++ -isystem /usr/include/libxml2 -I/build/bcl2fastq2-2.19.1.403/src/cxx/include -I/build/bcl2fastq2-2.19.1.403/bcl2fastq-build/cxx -I/ build/bcl2fastq2-2.19.1.403/bcl2fastq-build/cxx/lib/io -I/build/bcl2fastq2-2.19.1.403/src/cxx/lib/io -I/build/bcl2fastq2-2.19.1.403/bcl2fastq-build/cxx/common -g -O2 -fPIE -fstack-protector-strong -Wformat - Werror=format-security -std=c++11 -fopenmp -msse2 -Wall -Wextra -Wunused [...]
+/build/bcl2fastq2-2.19.1.403/src/cxx/lib/io/Xml.cpp: In function 'std::ostream& bcl2fastq::io::serializeAsXml(std::ostream&, const ptree&)':
+/build/bcl2fastq2-2.19.1.403/src/cxx/lib/io/Xml.cpp:171:136: error: no matching function for call to 'xml_writer_make_settings(char, int)'
+ boost::property_tree::write_xml(os, treeWithIndexAttributes, boost::property_tree::xml_writer_make_settings<std::string>(' ', 2));
+
+which seems to be explained here:
+
+ http://seqanswers.com/forums/archive/index.php/t-58052.html
+
+The problem does not happen with boost 1.62.
--
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