[med-svn] [r-bioc-biobase] 04/04: README.source for r-data file and upload to unstable

Andreas Tille tille at debian.org
Wed Aug 23 20:57:07 UTC 2017


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tille pushed a commit to tag debian/2.36.2-1
in repository r-bioc-biobase.

commit 9b046652164f912a2c322f6f460ccb9a55be060b
Author: Andreas Tille <tille at debian.org>
Date:   Wed Aug 23 20:53:47 2017 +0200

    README.source for r-data file and upload to unstable
---
 debian/README.source | 72 ++++++++++++++++++++++++++++++++++++++++++++++++++++
 debian/changelog     |  5 ++--
 2 files changed, 75 insertions(+), 2 deletions(-)

diff --git a/debian/README.source b/debian/README.source
new file mode 100644
index 0000000..61989ec
--- /dev/null
+++ b/debian/README.source
@@ -0,0 +1,72 @@
+Explanation for binary files inside source package according to
+  http://lists.debian.org/debian-devel/2013/09/msg00332.html
+
+Files: data/SW.rda
+Documented: man/class.eSet.Rd
+            Class to Contain High-Throughput Assays and Experimental Metadata
+
+Files: data/geneCovariate.rda
+Documented: man/data.geneData.Rd
+            Sample expression matrix and phenotype data.frames
+
+Files: data/reporter.rda
+Documented: man/data.reporter.Rd
+            Example data.frame representing reporter information
+
+Files: data/sample.ExpressionSet.rda
+Documented: man/class.ExpressionSet.Rd
+            Class to Contain and Describe High-Throughput Expression Level Assays
+
+Files: data/sample.MultiSet.rda
+Documented: man/data.sample.MultiSet.Rd
+            Data set of class 'MultiSet'
+
+Files: data/seD.rda
+Documented: data.geneData.Rd
+            Sample expression matrix and phenotype data.frames
+
+Files: inst/unitTests/VersionedClass_data/1.8/AnnotatedDataFrame.Rda
+       inst/unitTests/VersionedClass_data/1.8/ExpressionSet.Rda
+       inst/unitTests/VersionedClass_data/1.8/MIAME.Rda
+       inst/unitTests/VersionedClass_data/1.8/exprSet.Rda
+       inst/unitTests/VersionedClass_data/1.8/phenoData.Rda
+       inst/unitTests/VersionedClass_data/2.0/AnnotatedDataFrame.Rda
+       inst/unitTests/VersionedClass_data/2.0/ExpressionSet.Rda
+       inst/unitTests/VersionedClass_data/2.0/MIAME.Rda
+       inst/unitTests/VersionedClass_data/2.0/MultiSet.Rda
+       inst/unitTests/VersionedClass_data/2.0/ScalarCharacter.Rda
+       inst/unitTests/VersionedClass_data/2.0/SnpSet.Rda
+       inst/unitTests/VersionedClass_data/2.0/Versioned.Rda
+       inst/unitTests/VersionedClass_data/2.0/VersionedBiobase.Rda
+       inst/unitTests/VersionedClass_data/2.0/Versions.Rda
+       inst/unitTests/VersionedClass_data/2.0/VersionsNull.Rda
+       inst/unitTests/VersionedClass_data/2.0/aggregator.Rda
+       inst/unitTests/VersionedClass_data/2.0/container.Rda
+       inst/unitTests/VersionedClass_data/2.0/exprSet.Rda
+       inst/unitTests/VersionedClass_data/2.0/phenoData.Rda
+       inst/unitTests/VersionedClass_data/devel/AnnotatedDataFrame.Rda
+       inst/unitTests/VersionedClass_data/devel/ExpressionSet.Rda
+       inst/unitTests/VersionedClass_data/devel/MIAME.Rda
+       inst/unitTests/VersionedClass_data/devel/MultiSet.Rda
+       inst/unitTests/VersionedClass_data/devel/NChannelSet.Rda
+       inst/unitTests/VersionedClass_data/devel/SWPD.rda
+       inst/unitTests/VersionedClass_data/devel/ScalarCharacter.Rda
+       inst/unitTests/VersionedClass_data/devel/ScalarInteger.Rda
+       inst/unitTests/VersionedClass_data/devel/ScalarLogical.Rda
+       inst/unitTests/VersionedClass_data/devel/ScalarNumeric.Rda
+       inst/unitTests/VersionedClass_data/devel/SnpSet.Rda
+       inst/unitTests/VersionedClass_data/devel/Versioned.Rda
+       inst/unitTests/VersionedClass_data/devel/VersionedBiobase.Rda
+       inst/unitTests/VersionedClass_data/devel/Versions.Rda
+       inst/unitTests/VersionedClass_data/devel/VersionsNull.Rda
+       inst/unitTests/VersionedClass_data/devel/aggregator.Rda
+       inst/unitTests/VersionedClass_data/devel/bbsym.rda
+       inst/unitTests/VersionedClass_data/devel/container.Rda
+       inst/unitTests/VersionedClass_data/devel/eset.rda
+       inst/unitTests/VersionedClass_data/devel/exprSet.Rda
+       inst/unitTests/VersionedClass_data/devel/golubMergeSub.rda
+       inst/unitTests/VersionedClass_data/devel/sample.eSet.rda
+       inst/unitTests/VersionedClass_data/devel/sample.exprSet.1.rda
+       inst/unitTests/VersionedClass_data/devel/sample.exprSet.rda
+       inst/unitTests/VersionedClass_data/devel/swrep.rda
+These files are test results needed for comparisons in the test suite
diff --git a/debian/changelog b/debian/changelog
index 699ce7f..2bba1a1 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,9 +1,10 @@
-r-bioc-biobase (2.36.2-1) UNRELEASED; urgency=medium
+r-bioc-biobase (2.36.2-1) unstable; urgency=medium
 
   * New upstream version
   * Standards-Version: 4.0.1 (no changes needed)
+  * Document r-data files
 
- -- Andreas Tille <tille at debian.org>  Wed, 23 Aug 2017 20:27:24 +0200
+ -- Andreas Tille <tille at debian.org>  Wed, 23 Aug 2017 20:28:21 +0200
 
 r-bioc-biobase (2.34.0-1) unstable; urgency=medium
 

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