[med-svn] [apollo] 07/08: Re-add debian/ dir

Andreas Tille tille at debian.org
Fri Dec 1 15:43:17 UTC 2017


This is an automated email from the git hooks/post-receive script.

tille pushed a commit to branch master
in repository apollo.

commit a2aff7d5e5cd72ae316046c77d85bd5e38650745
Author: Andreas Tille <tille at debian.org>
Date:   Fri Dec 1 16:38:41 2017 +0100

    Re-add debian/ dir
---
 debian/changelog         |  5 +++++
 debian/compat            |  1 +
 debian/control           | 27 +++++++++++++++++++++++++++
 debian/copyright         | 11 +++++++++++
 debian/rules             |  6 ++++++
 debian/upstream/metadata | 12 ++++++++++++
 debian/watch             |  4 ++++
 7 files changed, 66 insertions(+)

diff --git a/debian/changelog b/debian/changelog
new file mode 100644
index 0000000..85f57d8
--- /dev/null
+++ b/debian/changelog
@@ -0,0 +1,5 @@
+apollo (2.0.8-1) UNRELEASED; urgency=low
+
+  * Initial release
+
+ -- Andreas Tille <tille at debian.org>  Fri, 01 Dec 2017 16:31:25 +0100
diff --git a/debian/compat b/debian/compat
new file mode 100644
index 0000000..f599e28
--- /dev/null
+++ b/debian/compat
@@ -0,0 +1 @@
+10
diff --git a/debian/control b/debian/control
new file mode 100644
index 0000000..527423d
--- /dev/null
+++ b/debian/control
@@ -0,0 +1,27 @@
+Source: apollo
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Andreas Tille <tille at debian.org>
+Section: science
+Priority: optional
+Build-Depends: debhelper (>= 10)
+Standards-Version: 3.9.8
+Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/gmod/apollo/trunk/
+Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/gmod/apollo/trunk/
+Homepage: http://genomearchitect.org/
+
+Package: apollo
+Architecture: any
+Depends: ${shlibs:Depends},
+         ${misc:Depends}
+Description: genome annotation viewer and editor
+ Apollo is a genome annotation viewer and editor. It was developed as a
+ collaboration between the Berkeley Drosophila Genome Project (part of
+ the FlyBase consortium) and The Sanger Institute in Cambridge, UK.
+ Apollo allows researchers to explore genomic annotations at many levels
+ of detail, and to perform expert annotation curation, all in a graphical
+ environment. It was used by the FlyBase biologists to construct the
+ Release 3 annotations on the finished Drosophila melanogaster genome,
+ and is also a primary vehicle for sharing these annotations with the
+ community. The Generic Model Organism Database (GMOD) project, which
+ aims to provide a complete ready-to-use toolkit for analyzing whole
+ genomes, has adopted Apollo as its annotation workbench.
diff --git a/debian/copyright b/debian/copyright
new file mode 100644
index 0000000..d544916
--- /dev/null
+++ b/debian/copyright
@@ -0,0 +1,11 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: Apollo
+Source: http://apollo.berkeleybop.org/current/install.html
+
+Files: *
+Copyright: © 2002-2010 <upstream>
+License: Artistic
+
+Files: debian/*
+Copyright: © 2012 Andreas Tille <tille at debian.org>
+License: Artistic
diff --git a/debian/rules b/debian/rules
new file mode 100755
index 0000000..6055261
--- /dev/null
+++ b/debian/rules
@@ -0,0 +1,6 @@
+#!/usr/bin/make -f
+
+# DH_VERBOSE := 1
+
+%:
+	dh $@
diff --git a/debian/upstream/metadata b/debian/upstream/metadata
new file mode 100644
index 0000000..97a8bed
--- /dev/null
+++ b/debian/upstream/metadata
@@ -0,0 +1,12 @@
+Reference:
+  Author: S E Lewis and S M J Searle and N Harris and M Gibson and V Lyer and J Richter and C Wiel and L Bayraktaroglir and E Birney and M A Crosby and J S Kaminker and B B Matthews and S E Prochnik and C D Smithy and J L Tupy and G M Rubin and S Misra and C J Mungall and M E Clamp
+  Title: "Apollo: a sequence annotation editor"
+  Journal: Genome Biology
+  Year: 2002
+  Volume: 3
+  Number: 12
+  Pages: research0082-0082.14
+  DOI: 10.1186/gb-2002-3-12-research0082
+  PMID: 12537571
+  URL: http://genomebiology.com/2002/3/12/research/0082
+  eprint: http://genomebiology.com/content/pdf/gb-2002-3-12-research0082.pdf
diff --git a/debian/watch b/debian/watch
new file mode 100644
index 0000000..d07827d
--- /dev/null
+++ b/debian/watch
@@ -0,0 +1,4 @@
+version=4
+
+https://github.com/GMOD/Apollo/releases .*/archive/(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz)
+

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