[med-svn] [bitseq] 02/02: Upstream metadata

[Andreas Tille]

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tille pushed a commit to branch master
in repository bitseq.

commit a51f3d32be4085be7efe4d4a3be713b470f13e4d
Author: Andreas Tille <tille at debian.org>
Date:   Sat Dec 2 11:35:34 2017 +0100

    Upstream metadata
---
 debian/rules             |  4 ++++
 debian/upstream/metadata | 19 +++++++++++++++++++
 2 files changed, 23 insertions(+)

diff --git a/debian/rules b/debian/rules
index 871ebf9..3e356c2 100755
--- a/debian/rules
+++ b/debian/rules
@@ -9,6 +9,7 @@ include /usr/share/dpkg/default.mk
 
 mandir=$(CURDIR)/debian/$(DEB_SOURCE)/usr/share/man/man1/
 bindir=$(CURDIR)/debian/$(DEB_SOURCE)/usr/bin/
+sharedir=$(CURDIR)/debian/$(DEB_SOURCE)/usr/share/$(DEB_SOURCE)
 
 %:
 	dh $@
@@ -58,6 +59,9 @@ override_dh_installman:
 
 override_dh_auto_install:
 	find -maxdepth 1 -type f -perm /111 -exec dh_install '{}' /usr/bin ';'
+	# do not provide rarely used Python scripts in /usr/bin
+	mkdir -p $(sharedir)
+	mv debian/$(DEB_SOURCE)/usr/bin/parseAlignment.py $(sharedir)
 
 get-orig-source:
 	mkdir -p ../tarballs
diff --git a/debian/upstream/metadata b/debian/upstream/metadata
new file mode 100644
index 0000000..4a3c4c0
--- /dev/null
+++ b/debian/upstream/metadata
@@ -0,0 +1,19 @@
+Reference:
+  Author: James Hensman and Panagiotis Papastamoulis and Peter Glaus and Antti Honkela and Magnus Rattray
+  Title: "Fast and accurate approximate inference of transcript expression from RNA-seq data"
+  Journal: Bioinformatics
+  Year: 2015
+  Volume: 31
+  Number: 24
+  Pages: 3881-9
+  DOI:  10.1093/bioinformatics/btv483
+  PMID: 26315907
+  URL: https://academic.oup.com/bioinformatics/article/31/24/3881/196984
+  eprint: https://academic.oup.com/bioinformatics/article-pdf/31/24/3881/17345182/btv483.pdf
+Registry:
+- Name: SciCrunch
+  Entry: SCR_009904
+- Name: bio.tools
+  Entry: NA
+- Name: OMICtools
+  Entry: OMICS_01269

-- 
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