[med-svn] [tophat] 05/07: Versioned Depends: samtools (>= 1.5) [Version since autopkgtest script fails for stretch featuring samtools 1.3!!]

Andreas Tille tille at debian.org
Wed Dec 6 15:16:19 UTC 2017


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tille pushed a commit to branch master
in repository tophat.

commit 6d223a30a636d76be9378f581f3a838b8e054998
Author: Andreas Tille <tille at debian.org>
Date:   Wed Dec 6 16:11:54 2017 +0100

    Versioned Depends: samtools (>= 1.5) [Version since autopkgtest script fails for stretch featuring samtools 1.3!!]
---
 debian/changelog | 1 +
 debian/control   | 3 ++-
 2 files changed, 3 insertions(+), 1 deletion(-)

diff --git a/debian/changelog b/debian/changelog
index 1e12291..b9967ad 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -18,6 +18,7 @@ tophat (2.1.1+dfsg1-1) UNRELEASED; urgency=medium
   * Remove unused license paragraph
   * Standards-Version: 4.1.1
   * Really remove samtools code copy also from source tarball
+  * Versioned Depends: samtools (>= 1.5)
 
  -- Fabian Klötzl <fabian at kloetzl.info>  Mon, 04 Dec 2017 13:13:31 +0100
 
diff --git a/debian/control b/debian/control
index 05bd064..f7cfd2f 100644
--- a/debian/control
+++ b/debian/control
@@ -24,7 +24,8 @@ Architecture: any
 Depends: ${shlibs:Depends},
          ${misc:Depends},
          python,
-         bowtie2 | bowtie
+         bowtie2 | bowtie,
+         samtools (>= 1.5)
 Suggests: cufflinks
 Description: fast splice junction mapper for RNA-Seq reads
  TopHat aligns RNA-Seq reads to mammalian-sized genomes using the ultra

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