[med-svn] [mage2tab] 03/15: Packaging in progress.

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a commit to branch master
in repository mage2tab.

commit aa95356e5ccc496abc112adc7991edd25ecb4522
Author: Charles Plessy <plessy at debian.org>
Date:   Tue Apr 15 04:38:38 2008 +0000

    Packaging in progress.
---
 debian/README.Debian        |  6 ------
 debian/control              | 31 ++++++++++++++++++++++++-------
 debian/copyright            | 37 ++++++++++++++-----------------------
 debian/mage2tab.doc-base.EX | 22 ----------------------
 debian/rules                |  8 +++++++-
 5 files changed, 45 insertions(+), 59 deletions(-)

diff --git a/debian/README.Debian b/debian/README.Debian
deleted file mode 100644
index 72ed02c..0000000
--- a/debian/README.Debian
+++ /dev/null
@@ -1,6 +0,0 @@
-mage2tab for Debian
--------------------
-
-<possible notes regarding this package - if none, delete this file>
-
- -- Charles Plessy <charles-debian-nospam at plessy.org>  Mon, 14 Apr 2008 10:39:30 +0900
diff --git a/debian/control b/debian/control
index c6c89e3..72572cc 100644
--- a/debian/control
+++ b/debian/control
@@ -1,13 +1,30 @@
 Source: mage2tab
-Section: unknown
-Priority: extra
-Maintainer: Charles Plessy <charles-debian-nospam at plessy.org>
+Section: science
+Priority: optional
+Maintainer: Debian-Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+DM-Upload-Allowed: yes
+Uploaders: Charles Plessy <charles-debian-nospam at plessy.org>
 Build-Depends: cdbs, debhelper (>= 5)
-Standards-Version: 3.7.2
+Standards-Version: 3.7.3
 Homepage: https://www.cbil.upenn.edu/magewiki/index.php/mage2tab
+Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/mage2tab/trunk/?rev=0&sc=0
+Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/mage2tab/trunk/
 
 Package: mage2tab
 Architecture: any
-Depends: ${shlibs:Depends}, ${misc:Depends}
-Description: <insert up to 60 chars description>
- <insert long description, indented with spaces>
+Section: perl
+Depends: ${shlibs:Depends}, ${misc:Depends}, ${perl:Depends},
+         libbio-mage-perl, libbio-mage-utils-perl, liblog-log4perl-perl,
+	 libxml-simple-perl
+Recommends: libdbi-perl, libwww-perl
+Suggests: libdbd-oracle-perl, libgus-perl, graphviz
+Description: MAGE-MLv1 converter and visualisater.
+ This tool-kit is part of MR_T, a framework for import or export various of
+ MAGE (MicroArray Gene Expression) documents (MAGE-MLv1, MAGE-TAB, SOFT,
+ MINiML) from or into databases like GUS (the Genomics Unified Schema,
+ www.gusdb.org). 
+ .
+ This package provides the following programs:
+  mage2tab	—	MAGE-MLv1 to MAGE-TAB converter
+  mage2graph	—	GraphViz-based mage data visulaization tool
+  mage-checker	—	Validation tool
diff --git a/debian/copyright b/debian/copyright
index 21cbcf3..c79d428 100644
--- a/debian/copyright
+++ b/debian/copyright
@@ -1,24 +1,15 @@
-This package was debianized by Charles Plessy <charles-debian-nospam at plessy.org> on
-Mon, 14 Apr 2008 10:39:30 +0900.
-
-It was downloaded from http://www.cbil.upenn.edu/downloads/RAD/mage2tab-v0.9.tar.gz
-
-Upstream Author(s): 
-
-    <put author's name and email here>
-    <likewise for another author>
-
-Copyright: 
-
-    <Copyright (C) YYYY Name OfAuthor>
-    <likewise for another author>
-
+X-Format-Specification: http://wiki.debian.org/Proposals/CopyrightFormat
+X-Debianized-By: Charles Plessy <charles-debian-nospam at plessy.org>
+X-Debianized-Date: Mon, 14 Apr 2008 10:39:30 +0900
+X-Source-Downloaded-From: http://www.cbil.upenn.edu/downloads/RAD/mage2tab-v0.9.tar.gz
+X-Upstream-Author: Junmin Liu (junmin at pcbi.upenn.edu), 
+                   John Brestelli (jbrestel at pcbi.upenn.edu)
+
+Files: debian/*
+Copyrignt: © 2008 Charles Plessy <charles-debian-nospam at plessy.org>
+License: same as mage2tab itself.
+
+Files: *
+Copyrignt: © 2007 The Computational Biology and Informatics Laboratory (CBIL)
+            at the University of Pennsylvania. All rights reserved.
 License:
-
-    <Put the license of the package here indented by 4 spaces>
-
-The Debian packaging is (C) 2008, Charles Plessy <charles-debian-nospam at plessy.org> and
-is licensed under the GPL, see `/usr/share/common-licenses/GPL'.
-
-# Please also look if there are files or directories which have a
-# different copyright/license attached and list them here.
diff --git a/debian/mage2tab.doc-base.EX b/debian/mage2tab.doc-base.EX
deleted file mode 100644
index 25cdf31..0000000
--- a/debian/mage2tab.doc-base.EX
+++ /dev/null
@@ -1,22 +0,0 @@
-Document: mage2tab
-Title: Debian mage2tab Manual
-Author: <insert document author here>
-Abstract: This manual describes what mage2tab is
- and how it can be used to
- manage online manuals on Debian systems.
-Section: unknown
-
-Format: debiandoc-sgml
-Files: /usr/share/doc/mage2tab/mage2tab.sgml.gz
-
-Format: postscript
-Files: /usr/share/doc/mage2tab/mage2tab.ps.gz
-
-Format: text
-Files: /usr/share/doc/mage2tab/mage2tab.text.gz
-
-Format: HTML
-Index: /usr/share/doc/mage2tab/html/index.html
-Files: /usr/share/doc/mage2tab/html/*.html
-
-  
diff --git a/debian/rules b/debian/rules
index 9ecd02a..e74948d 100755
--- a/debian/rules
+++ b/debian/rules
@@ -1,4 +1,10 @@
 #!/usr/bin/make -f
   
 include /usr/share/cdbs/1/rules/debhelper.mk
-include /usr/share/cdbs/1/class/perlmodule.mk
+
+configure/mage2tab::
+	prename s/\.pl// $(CURDIR)/debian/mage2tab/usr/bin/*pl
+#	mkdir $(CURDIR)/debian/mage2tab/usr/bin
+#	for script in bin/*.pl ; \
+#	do install script $(CURDIR)/debian/mage2tab/usr/bin/$$(basename script .pl) \
+#	done

-- 
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