[med-svn] [patman] 06/08: Upstream provides own manpage - nice. :-)

[Andreas Tille]

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tille pushed a commit to branch master
in repository patman.

commit 159d24f9b7496922739c1452a87201a1270a7f41
Author: Andreas Tille <tille at debian.org>
Date:   Wed Dec 13 20:48:51 2017 +0100

    Upstream provides own manpage - nice. :-)
---
 debian/createmanpages | 22 ---------------------
 debian/manpages       |  2 +-
 debian/patman.1       | 53 ---------------------------------------------------
 3 files changed, 1 insertion(+), 76 deletions(-)

diff --git a/debian/createmanpages b/debian/createmanpages
deleted file mode 100755
index d1c3577..0000000
--- a/debian/createmanpages
+++ /dev/null
@@ -1,22 +0,0 @@
-#!/bin/sh
-MANDIR=debian
-mkdir -p $MANDIR
-
-VERSION=`dpkg-parsechangelog | awk '/^Version:/ {print $2}' | sed -e 's/^[0-9]*://' -e 's/-.*//' -e 's/[+~]dfsg$//'`
-
-AUTHOR=".SH AUTHOR\nThis manpage was written by $DEBFULLNAME for the Debian distribution and
-can be used for any other usage of the program.
-"
-
-progname=patman
-help2man --no-info --no-discard-stderr  \
-         --name='rapid alignment of short sequences to large databases' \
-            --version-string="$VERSION" ${progname} > $MANDIR/${progname}.1
-echo $AUTHOR >> $MANDIR/${progname}.1
-
-cat <<EOT
-Please enhance the help2man output.
-The following web page might be helpful in doing so:
-    http://liw.fi/manpages/
-EOT
-
diff --git a/debian/manpages b/debian/manpages
index 0f65186..a43afbd 100644
--- a/debian/manpages
+++ b/debian/manpages
@@ -1 +1 @@
-debian/*.1
+patman.1
diff --git a/debian/patman.1 b/debian/patman.1
deleted file mode 100644
index d21bbc5..0000000
--- a/debian/patman.1
+++ /dev/null
@@ -1,53 +0,0 @@
-.TH PATMAN "1" "December 2017" "patman 1.2.2" "User Commands"
-.SH NAME
-patman \- rapid alignment of short sequences to large databases
-.SH SYNOPSIS
-.B patman
-[\fI\,OPTION\/\fR...] [\fI\,input-file\/\fR...]
-.SH DESCRIPTION
-Patman searches for short patterns in large DNA databases, allowing
-for approximate matches. It is optimized for searching for many small
-pattern at the same time, for example microarray probes.
-.SH OPTIONS
-.TP
-\fB\-V\fR, \fB\-\-version\fR
-Print version number and exit
-.TP
-\fB\-e\fR, \fB\-\-edits\fR=\fI\,N\/\fR
-Set maximum edit distance to N (default: 2)
-.TP
-\fB\-g\fR, \fB\-\-gaps\fR=\fI\,N\/\fR
-Set maximum number of gaps to N (default: 0)
-.TP
-\fB\-D\fR, \fB\-\-databases\fR
-Following files are databases
-.TP
-\fB\-P\fR, \fB\-\-patterns\fR
-Following files contain patterns
-.TP
-\fB\-o\fR, \fB\-\-output\fR=\fI\,FILE\/\fR
-Write output to FILE
-.TP
-\fB\-a\fR, \fB\-\-ambicodes\fR
-Interpret ambiguity codes in patterns
-.TP
-\fB\-s\fR, \fB\-\-singlestrand\fR
-Do not match reverse\-complements
-.TP
-\fB\-p\fR, \fB\-\-prefetch\fR=\fI\,N\/\fR
-Prefetch N nodes (default: 3)
-.TP
-\fB\-q\fR, \fB\-\-quiet\fR
-Turn off warnings
-.TP
-\fB\-v\fR, \fB\-\-verbose\fR
-Print additional progress reports
-.SS "Help options:"
-.TP
-\-?, \fB\-\-help\fR
-Show this help message
-.TP
-\fB\-\-usage\fR
-Display brief usage message
-.SH AUTHOR
-This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.

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