[med-svn] [spades] 02/08: Update upstream source from tag 'upstream/3.11.1+dfsg'

[Sascha Steinbiss]

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satta pushed a commit to branch master
in repository spades.

commit 27c414aaef6c04f52eff0e2c4350ee8026e4355d
Merge: 8d1888b ff1368d
Author: Sascha Steinbiss <satta at debian.org>
Date:   Sun Dec 17 22:46:48 2017 +0000

    Update upstream source from tag 'upstream/3.11.1+dfsg'
    
    Update to upstream version '3.11.1+dfsg'
    with Debian dir c5350468e97b6aa81fba2562730b18e8ce0d0c1e

 LICENSE                                            |  7 ++--
 README                                             |  9 +++--
 VERSION                                            |  2 +-
 changelog.html                                     | 10 ++++++
 manual.html                                        | 38 +++++++++++-----------
 metaspades.py                                      | 14 ++++++--
 plasmidspades.py                                   | 14 ++++++--
 rnaspades.py                                       | 14 ++++++--
 rnaspades_manual.html                              |  2 +-
 spades.py                                          | 14 ++++++--
 src/cmake/pack.cmake                               |  4 +--
 .../graph_support/scaff_supplementary.cpp          |  8 +++--
 src/projects/ionhammer/config_struct.hpp           | 12 +++----
 src/spades_pipeline/common/SeqIO.py                |  7 ++--
 src/spades_pipeline/corrector_logic.py             |  2 +-
 15 files changed, 105 insertions(+), 52 deletions(-)

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