[med-svn] [netepi-collection] 11/13: Update upstream source from tag 'upstream/1.8.4'
Andreas Tille
tille at debian.org
Tue Dec 26 14:03:31 UTC 2017
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository netepi-collection.
commit 7c46b5ffe0d3db00670c95f777cea964de695cc3
Merge: 1dcc2e1 6533344
Author: Andreas Tille <tille at debian.org>
Date: Tue Dec 26 14:57:22 2017 +0100
Update upstream source from tag 'upstream/1.8.4'
Update to upstream version '1.8.4'
with Debian dir 5c985d6655e4ab8164199cd8bad57ea5dd376003
CHANGES | 1302 ++
CONTRIBUTORS | 32 +
LGPL.txt | 504 +
LICENCE | 603 +
LiveCD/README | 23 +
LiveCD/README.html | 129 +
LiveCD/config | 8 +
LiveCD/images/h5n1.jpg | Bin 0 -> 446523 bytes
LiveCD/images/netepi-live-splash.README | 15 +
LiveCD/images/netepi-live-splash.pcx | Bin 0 -> 17680 bytes
LiveCD/images/netepi-live-splash.xcf | Bin 0 -> 36506 bytes
LiveCD/mk-ubuntu-livecd | 502 +
LiveCD/mk-ubuntu-livecd-7.10 | 535 +
MANIFEST.in | 33 +
Makefile | 37 +
PKG-INFO | 10 +
README | 1002 +
README.mac | 78 +
README.selinux | 21 +
Selenium/CollectionTest1.html | 1240 ++
Selenium/CollectionTest2.html | 510 +
Selenium/CollectionTest3a.html | 20059 +++++++++++++++++++
Selenium/CollectionTest3b.html | 19575 ++++++++++++++++++
Selenium/CollectionTest3c.html | 19333 ++++++++++++++++++
Selenium/CollectionTest3d.html | 19333 ++++++++++++++++++
Selenium/TestSuite.html | 43 +
Selenium/make_CollectionTest3.py | 276 +
Trac_licence.txt | 32 +
app/admin.js | 470 +
app/app.py | 82 +
app/backiframe.html | 8 +
app/calendar.css | 225 +
app/calendar.js | 1806 ++
app/cmdline.py | 94 +
app/formhelpers.js | 262 +
app/help/admin_help.html | 55 +
app/help/contributors.html | 52 +
app/help/copyright.html | 622 +
app/help/help.html | 55 +
app/help/index.html | 21 +
app/help/wiki_help.html | 235 +
app/helpers.js | 824 +
app/index.html | 29 +
app/lang/calendar-en.js | 127 +
app/menu.py | 161 +
app/nobbleback.js | 87 +
app/printforms.css | 192 +
app/sorttable.js | 119 +
app/style-gallery.html | 1091 +
app/style.css | 1919 ++
app/wiki.css | 25 +
casemgr/__init__.py | 18 +
casemgr/addressstate.py | 71 +
casemgr/admin/__init__.py | 18 +
casemgr/admin/dropsyndrome.py | 104 +
casemgr/admin/formedit.py | 385 +
casemgr/admin/formmeta.py | 246 +
casemgr/admin/formrollforward.py | 68 +
casemgr/admin/questionedit.py | 540 +
casemgr/admin/search.py | 290 +
casemgr/admin/tablediff.py | 223 +
casemgr/albasetup.py | 295 +
casemgr/bulletins.py | 76 +
casemgr/cached.py | 62 +
casemgr/caseaccess.py | 52 +
casemgr/caseassignment.py | 51 +
casemgr/casedupe.py | 118 +
casemgr/casemerge.py | 414 +
casemgr/cases.py | 348 +
casemgr/caseset.py | 303 +
casemgr/casestatus.py | 54 +
casemgr/casetags.py | 233 +
casemgr/cmdline/README | 35 +
casemgr/cmdline/__init__.py | 18 +
casemgr/cmdline/cmdcommon.py | 164 +
casemgr/cmdline/dupscan.py | 61 +
casemgr/cmdline/exportcases.py | 119 +
casemgr/cmdline/exportform.py | 49 +
casemgr/cmdline/exportreport.py | 43 +
casemgr/cmdline/geocodechangedaddresses.py | 170 +
casemgr/cmdline/importxml.py | 234 +
casemgr/cmdline/listforms.py | 35 +
casemgr/cmdline/listreports.py | 116 +
casemgr/cmdline/listsyndromes.py | 33 +
casemgr/cmdline/notifychangedfields.py | 249 +
casemgr/cmdline/notifymon.py | 57 +
casemgr/cmdline/personindex.py | 42 +
casemgr/cmdline/report.py | 108 +
casemgr/contacts.py | 324 +
casemgr/credentials.py | 418 +
casemgr/dataexport.py | 465 +
casemgr/dataimp/__init__.py | 20 +
casemgr/dataimp/common.py | 23 +
casemgr/dataimp/dataimp.py | 461 +
casemgr/dataimp/datasrc.py | 309 +
casemgr/dataimp/editor.py | 651 +
casemgr/dataimp/elements.py | 306 +
casemgr/dataimp/xmlload.py | 119 +
casemgr/dataimp/xmlsave.py | 141 +
casemgr/demogfields.py | 1108 +
casemgr/exportselect.py | 93 +
casemgr/form_summary.py | 429 +
casemgr/formmerge.py | 275 +
casemgr/formutils/__init__.py | 27 +
casemgr/formutils/delete.py | 43 +
casemgr/formutils/deploy.py | 37 +
casemgr/formutils/exclusiveop.py | 40 +
casemgr/formutils/rename.py | 33 +
casemgr/formutils/usedby.py | 48 +
casemgr/fuzzyperson.py | 62 +
casemgr/globals.py | 35 +
casemgr/handle_exception.py | 123 +
casemgr/logview.py | 116 +
casemgr/mergelabels.py | 51 +
casemgr/messages.py | 83 +
casemgr/nickcache.py | 38 +
casemgr/nicknames.py | 913 +
casemgr/notification/__init__.py | 18 +
casemgr/notification/client.py | 177 +
casemgr/notification/daemon.py | 263 +
casemgr/notification/socketcore.py | 109 +
casemgr/notify.py | 89 +
casemgr/paged_search.py | 271 +
casemgr/person.py | 403 +
casemgr/persondupe.py | 599 +
casemgr/persondupecfg.py | 128 +
casemgr/persondupestat.py | 50 +
casemgr/personmerge.py | 335 +
casemgr/phonetic_encode.py | 1297 ++
casemgr/preferences.py | 145 +
casemgr/printforms.py | 114 +
casemgr/pwcrypt.py | 116 +
casemgr/reports/__init__.py | 30 +
casemgr/reports/common.py | 37 +
casemgr/reports/contactvis.py | 317 +
casemgr/reports/crosstab.py | 390 +
casemgr/reports/epicurve.py | 608 +
casemgr/reports/export.py | 271 +
casemgr/reports/linereport.py | 171 +
casemgr/reports/report.py | 358 +
casemgr/reports/reportcolumns.py | 426 +
casemgr/reports/reportfilters.py | 1041 +
casemgr/reports/store.py | 247 +
casemgr/reports/xmlload.py | 317 +
casemgr/resultpersons.py | 182 +
casemgr/rights.py | 240 +
casemgr/schema/__init__.py | 18 +
casemgr/schema/check.py | 92 +
casemgr/schema/report_1_6/__init__.py | 23 +
casemgr/schema/report_1_6/convert.py | 67 +
casemgr/schema/report_1_6/report.py | 97 +
casemgr/schema/report_1_6/reportcolumns.py | 72 +
casemgr/schema/report_1_6/reportcrosstab.py | 49 +
casemgr/schema/report_1_6/reportfilters.py | 250 +
casemgr/schema/schema.py | 503 +
casemgr/schema/seed.py | 145 +
casemgr/schema/upgrade.py | 865 +
casemgr/search.py | 204 +
casemgr/sendmail.py | 86 +
casemgr/svnrev.py | 1 +
casemgr/syndcategorical.py | 208 +
casemgr/syndrome.py | 346 +
casemgr/tabs.py | 105 +
casemgr/taskdesc.py | 107 +
casemgr/tasks.py | 631 +
casemgr/tasksearch.py | 299 +
casemgr/unituser.py | 154 +
casemgr/user_edit.py | 377 +
casemgr/user_search.py | 201 +
casemgr/version.py | 22 +
cocklebur/__init__.py | 18 +
cocklebur/agelib.py | 292 +
cocklebur/checkdigit.py | 51 +
cocklebur/compat.py | 42 +
cocklebur/countries.py | 280 +
cocklebur/daemonize.py | 42 +
cocklebur/datetime.py | 528 +
cocklebur/dbobj/__init__.py | 40 +
cocklebur/dbobj/cache.py | 46 +
cocklebur/dbobj/column_describer.py | 394 +
cocklebur/dbobj/database_describer.py | 474 +
cocklebur/dbobj/dbapi.py | 45 +
cocklebur/dbobj/exec_timing.py | 57 +
cocklebur/dbobj/execute.py | 94 +
cocklebur/dbobj/misc.py | 181 +
cocklebur/dbobj/participation_table.py | 242 +
cocklebur/dbobj/query_builder.py | 393 +
cocklebur/dbobj/result.py | 480 +
cocklebur/dbobj/table_describer.py | 205 +
cocklebur/dbobj/table_dict.py | 83 +
cocklebur/dbobj/table_extras.py | 40 +
cocklebur/exepath.py | 27 +
cocklebur/filename_safe.py | 35 +
cocklebur/foreign_key.py | 85 +
cocklebur/form_ui/__init__.py | 24 +
cocklebur/form_ui/columns.py | 134 +
cocklebur/form_ui/common.py | 35 +
cocklebur/form_ui/elements.py | 268 +
cocklebur/form_ui/formdata.py | 36 +
cocklebur/form_ui/formlib.py | 332 +
cocklebur/form_ui/inputbase.py | 295 +
cocklebur/form_ui/inputs/__init__.py | 37 +
cocklebur/form_ui/inputs/core.py | 139 +
cocklebur/form_ui/inputs/datetime.py | 86 +
cocklebur/form_ui/inputs/health.py | 57 +
cocklebur/form_ui/jsmeta.py | 149 +
cocklebur/form_ui/pyload.py | 33 +
cocklebur/form_ui/pysave.py | 98 +
cocklebur/form_ui/xmlload.py | 231 +
cocklebur/form_ui/xmlsave.py | 130 +
cocklebur/group_edit.py | 80 +
cocklebur/hsv.py | 27 +
cocklebur/introspect.py | 36 +
cocklebur/languages.py | 60 +
cocklebur/pageops.py | 325 +
cocklebur/pt.py | 175 +
cocklebur/safehtml.py | 293 +
cocklebur/tablesearch.py | 79 +
cocklebur/template.py | 49 +
cocklebur/temporary_file.py | 39 +
cocklebur/tests/Makefile | 7 +
cocklebur/tests/dbobj.py | 315 +
cocklebur/trafficlight.py | 33 +
cocklebur/tuplestruct.py | 67 +
cocklebur/utils.py | 104 +
cocklebur/xmlparse.py | 261 +
cocklebur/xmlwriter.py | 127 +
config.py | 164 +
doc/Collection-ER.dia | 11871 +++++++++++
doc/Collection-ER.pdf | Bin 0 -> 42374 bytes
doc/Collection-ER.png | Bin 0 -> 271239 bytes
doc/CollectionApp.dot | 217 +
doc/CollectionApp.svg | 2994 +++
doc/DEVNOTES | 25 +
doc/HINTS | 61 +
doc/Makefile | 37 +
doc/sillyquery | 58 +
forms/hospital_admit.form | 58 +
forms/lab_culture.form | 75 +
forms/lab_direct_ag.form | 59 +
forms/lab_haem_biochem.form | 92 +
forms/lab_pcr.form | 118 +
forms/lab_serology.form | 148 +
forms/sars_china.form | 154 +
forms/sars_exposure.form | 37 +
forms/sars_followup.form | 111 +
forms/sars_hk.form | 75 +
forms/sars_onset.form | 48 +
forms/sars_symptoms.form | 184 +
forms/sars_travel.form | 57 +
forms/spox_case.form | 220 +
forms/spox_exposure.form | 126 +
forms/spox_history.form | 90 +
forms/spox_laboratory.form | 43 +
forms/treatment_details.form | 68 +
httpinteract/LICENCE | 541 +
httpinteract/README | 54 +
httpinteract/gnuplot.py | 44 +
httpinteract/httpinteract.cgi | 132 +
httpinteract/httpinteract.css | 86 +
httpinteract/httpinteract.js | 270 +
httpinteract/httpinteract_soomload.py | 177 +
httpinteract/index.html | 71 +
httpinteract/schema | 20 +
httpinteract/sitemap_tim.csv | 35 +
images/add-input.png | Bin 0 -> 1166 bytes
images/add-paste.png | Bin 0 -> 1333 bytes
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images/title-gradient.png | Bin 0 -> 397 bytes
install.py | 149 +
labsurv/LICENCE | 548 +
labsurv/README | 46 +
labsurv/app/app.py | 243 +
labsurv/app/help.html | 133 +
labsurv/app/helpers.js | 138 +
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labsurv/app/images/favicon.ico | Bin 0 -> 766 bytes
labsurv/app/images/help-g.png | Bin 0 -> 2851 bytes
labsurv/app/style.css | 185 +
labsurv/install.py | 96 +
labsurv/labsurv/__init__.py | 16 +
labsurv/labsurv/dbapi.py | 159 +
labsurv/labsurv/labsurv.py | 686 +
labsurv/labsurv/pcode.py | 14737 ++++++++++++++
labsurv/liccheck.py | 77 +
labsurv/pages/cases.html | 74 +
labsurv/pages/date.html | 60 +
labsurv/pages/details.html | 53 +
labsurv/pages/macros.html | 69 +
labsurv/pages/submit.html | 123 +
labsurv/pages/totals.html | 42 +
labsurv/schema/chown | 7 +
labsurv/schema/schema.sql | 80 +
labsurv/schema/upgrade1.sql | 10 +
labsurv/simpleinst/__init__.py | 66 +
labsurv/simpleinst/config_register.py | 185 +
labsurv/simpleinst/defaults.py | 25 +
labsurv/simpleinst/filter.py | 33 +
labsurv/simpleinst/glob.py | 49 +
labsurv/simpleinst/install_files.py | 190 +
labsurv/simpleinst/platform.py | 65 +
labsurv/simpleinst/pyinstaller.py | 30 +
labsurv/simpleinst/usergroup.py | 47 +
labsurv/simpleinst/utils.py | 112 +
labsurv/tools/pcload.py | 38 +
liccheck.py | 93 +
load/README | 155 +
load/formtest2.py | 467 +
load/testdata.csv.gz | Bin 0 -> 42933 bytes
mail/exception_notify | 4 +
mail/register_invite | 11 +
mail/registration_notify | 14 +
mail/too_many_attempts | 12 +
pages/__init__.py | 18 +
pages/admin.html | 364 +
pages/admin.py | 88 +
pages/admin_address_states.html | 67 +
pages/admin_address_states.py | 60 +
pages/admin_bulletin.html | 81 +
pages/admin_bulletin.py | 102 +
pages/admin_bulletins.html | 81 +
pages/admin_bulletins.py | 60 +
pages/admin_contact_type.html | 57 +
pages/admin_contact_type.py | 101 +
pages/admin_contact_types.html | 48 +
pages/admin_contact_types.py | 52 +
pages/admin_form_deploy.html | 77 +
pages/admin_form_deploy.py | 112 +
pages/admin_form_diff.html | 37 +
pages/admin_form_diff.py | 53 +
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pages/admin_form_edit_input.html | 232 +
pages/admin_form_edit_question.html | 193 +
pages/admin_form_edit_question.py | 90 +
pages/admin_form_preview.html | 33 +
pages/admin_form_preview.py | 46 +
pages/admin_forms.html | 74 +
pages/admin_forms.py | 58 +
pages/admin_group.html | 85 +
pages/admin_group.py | 87 +
pages/admin_groups.html | 69 +
pages/admin_groups.py | 53 +
pages/admin_queue.html | 102 +
pages/admin_queue.py | 113 +
pages/admin_queues.html | 63 +
pages/admin_queues.py | 53 +
pages/admin_synd_categ.html | 76 +
pages/admin_synd_categ.py | 74 +
pages/admin_synd_clear.html | 63 +
pages/admin_synd_clear.py | 53 +
pages/admin_synd_drop.html | 63 +
pages/admin_synd_drop.py | 53 +
pages/admin_synd_fields.html | 143 +
pages/admin_synd_fields.py | 83 +
pages/admin_syndrome.html | 131 +
pages/admin_syndrome.py | 169 +
pages/admin_syndromes.html | 72 +
pages/admin_syndromes.py | 65 +
pages/admin_unit.html | 192 +
pages/admin_unit.py | 122 +
pages/admin_units.html | 95 +
pages/admin_units.py | 87 +
pages/admin_user.html | 193 +
pages/admin_user.py | 94 +
pages/admin_users.html | 71 +
pages/admin_users.py | 73 +
pages/admin_view_right.html | 127 +
pages/admin_view_right.py | 46 +
pages/admin_wikiedit.html | 56 +
pages/admin_wikiedit.py | 64 +
pages/bulletin_detail.html | 50 +
pages/bulletin_detail.py | 44 +
pages/bulletin_list.html | 47 +
pages/case.html | 59 +
pages/case.py | 234 +
pages/caseaccess.html | 45 +
pages/caseaccess.py | 67 +
pages/casecontacts.html | 107 +
pages/casecontacts.py | 107 +
pages/casecontacts_assoc.html | 110 +
pages/casecontacts_assoc.py | 69 +
pages/caseform.html | 57 +
pages/caseform.py | 138 +
pages/caseprint.html | 247 +
pages/caseprint.py | 31 +
pages/caseset_ops.py | 159 +
pages/casetask.html | 34 +
pages/casetask.py | 44 +
pages/casetasks.py | 68 +
pages/dataimp.html | 272 +
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pages/dataimp_view.html | 39 +
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pages/demogfields.html | 161 +
pages/dupecases.html | 62 +
pages/dupecases.py | 50 +
pages/dupecases_config.html | 51 +
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pages/dupepersons.html | 96 +
pages/dupepersons.py | 137 +
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pages/dupepersons_config.py | 93 +
pages/dupepersons_config_edit.html | 63 +
pages/dupepersons_config_edit.py | 45 +
pages/error_layout.html | 66 +
pages/export.html | 139 +
pages/export.py | 57 +
pages/form.html | 275 +
pages/form_inputs.html | 169 +
pages/group_edit.html | 42 +
pages/login.html | 131 +
pages/login.py | 74 +
pages/logview.html | 73 +
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pages/main.html | 153 +
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pages/manualdupe.html | 43 +
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pages/traceback.html | 32 +
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pages/unitview.html | 49 +
pages/unitview.py | 47 +
pages/user_browser.html | 25 +
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pages/user_queues.html | 63 +
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pages/user_sponsor.html | 101 +
pages/user_sponsor.py | 114 +
pages/useradmin.html | 72 +
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pages/useredit.html | 252 +
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sdist.py | 42 +
simpleinst/__init__.py | 66 +
simpleinst/config_register.py | 185 +
simpleinst/defaults.py | 25 +
simpleinst/filter.py | 33 +
simpleinst/glob.py | 49 +
simpleinst/install_files.py | 190 +
simpleinst/platform.py | 65 +
simpleinst/pyinstaller.py | 30 +
simpleinst/usergroup.py | 47 +
simpleinst/utils.py | 112 +
test.py | 67 +
tests/__init__.py | 18 +
tests/adminformedit.py | 94 +
tests/age.py | 85 +
tests/data/adminformedit/test0.form | 35 +
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tests/data/export/result.csv | 4 +
tests/data/hospital_admit.form | 58 +
tests/data/sars_exposure.form | 48 +
tests/data/tables/address_states.csv | 9 +
tests/data/tables/case_acl.csv | 6 +
tests/data/tables/case_form_summary.csv | 5 +
tests/data/tables/case_tags.csv | 4 +
tests/data/tables/cases.csv | 6 +
tests/data/tables/forms.csv | 3 +
tests/data/tables/hospital_admit.csv | 1 +
tests/data/tables/persons.csv | 4 +
tests/data/tables/sars_exposure.csv | 5 +
tests/data/tables/syndrome_case_assignments.csv | 19 +
tests/data/tables/syndrome_case_status.csv | 5 +
tests/data/tables/syndrome_forms.csv | 4 +
tests/data/tables/syndrome_types.csv | 3 +
tests/data/tables/tags.csv | 4 +
tests/data/tables/units.csv | 4 +
tests/data/tables/users.csv | 3 +
tests/dataimp/__init__.py | 18 +
tests/dataimp/dataimp.py | 307 +
tests/dataimp/datasrc.py | 113 +
tests/dataimp/editor.py | 253 +
tests/dataimp/xmlsaveload.py | 79 +
tests/datetimetest.py | 262 +
tests/dbobj/__init__.py | 37 +
tests/dbobj/participation_table.py | 243 +
tests/dbobj/query_builder.py | 392 +
tests/dbobj/result.py | 353 +
tests/demogfields.py | 209 +
tests/export.py | 117 +
tests/form.py | 83 +
tests/formcommon.py | 40 +
tests/formlib.py | 153 +
tests/formsave.py | 125 +
tests/parse_addr.py | 71 +
tests/person.py | 47 +
tests/persondupe.py | 140 +
tests/reports/__init__.py | 18 +
tests/reports/columns.py | 134 +
tests/reports/common.py | 75 +
tests/reports/crosstab.py | 170 +
tests/reports/export.py | 70 +
tests/reports/filters.py | 465 +
tests/reports/linereport.py | 66 +
tests/reports/orderby.py | 69 +
tests/reports/savenload.py | 210 +
tests/searchacl.py | 117 +
tests/testcommon.py | 238 +
tests/tuplestruct.py | 51 +
tests/wikiformatting.py | 228 +
tests/xmlparse.py | 123 +
tools/client_report.py | 431 +
tools/client_report1.png | Bin 0 -> 46623 bytes
tools/client_report2.png | Bin 0 -> 36801 bytes
tools/client_report3.png | Bin 0 -> 50539 bytes
tools/client_report4.png | Bin 0 -> 58924 bytes
tools/client_report5.png | Bin 0 -> 46934 bytes
tools/client_report6.png | Bin 0 -> 36548 bytes
tools/client_report_page.py | 64 +
tools/compile_db.py | 139 +
tools/csvfilter.py | 149 +
tools/csvsplit.py | 98 +
tools/desc_csv.py | 89 +
tools/dupescangraph.py | 43 +
tools/extract_demogfields.py | 48 +
tools/faxtag.py | 121 +
tools/form_to_xml.py | 37 +
tools/formexport.py | 204 +
tools/hdfilter.py | 206 +
tools/hrigcalc.html | 180 +
tools/mod_auth_pgsql-2.0.3-netepi.4101/INSTALL | 48 +
tools/mod_auth_pgsql-2.0.3-netepi.4101/Makefile | 12 +
tools/mod_auth_pgsql-2.0.3-netepi.4101/README | 22 +
.../mod_auth_pgsql-2.0.3-netepi.4101/README.netepi | 62 +
tools/mod_auth_pgsql-2.0.3-netepi.4101/TODO | 7 +
.../mod_auth_pgsql.c | 1236 ++
.../mod_auth_pgsql.html | 608 +
tools/pgcasttest.py | 59 +
tools/populate_cases_contacts.py | 114 +
tools/populate_cases_random.py | 78 +
tools/populate_tasks.py | 108 +
tools/quarantine_export.py | 183 +
tools/seed/data/case_status | 4 +
tools/seed/data/forms | 0
tools/seed/data/group_syndromes | 4 +
tools/seed/data/groups | 6 +
tools/seed/data/syndrome_forms | 16 +
tools/seed/data/syndrome_types | 2 +
tools/seed/data/unit_groups | 9 +
tools/seed/data/unit_users | 8 +
tools/seed/data/units | 6 +
tools/seed/data/users | 8 +
tools/seed/seed_db | 48 +
tools/userdump | 25 +
tools/userrestore | 43 +
tools/visdb.py | 47 +
tools/xmltagfix.py | 36 +
wiki/__init__.py | 0
wiki/api.py | 217 +
wiki/core.py | 209 +
wiki/env.py | 137 +
wiki/formatter.py | 699 +
wiki/href.py | 163 +
wiki/log.py | 70 +
wiki/util.py | 635 +
679 files changed, 197772 insertions(+)
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