[med-svn] [tab2mage] 02/12: [svn-inject] Applying Debian modifications to trunk
Andreas Tille
tille at debian.org
Sat Dec 30 16:40:41 UTC 2017
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository tab2mage.
commit 3fbd4c2a828fa4dfdfdf849b2a741e4601c3d1b8
Author: Charles Plessy <plessy at debian.org>
Date: Mon Apr 14 02:04:55 2008 +0000
[svn-inject] Applying Debian modifications to trunk
---
debian/README.Debian | 6 ++++
debian/TODO | 41 +++++++++++++++++++++++
debian/changelog | 6 ++++
debian/compat | 1 +
debian/control | 19 +++++++++++
debian/copyright | 24 +++++++++++++
debian/cron.d.ex | 4 +++
debian/dirs | 2 ++
debian/docs | 3 ++
debian/examples | 1 +
debian/menu.ex | 2 ++
debian/patches/add-binaries-to-make-install.patch | 14 ++++++++
debian/patches/series | 1 +
debian/rules | 5 +++
debian/tab2mage-default.ex | 10 ++++++
debian/tab2mage.doc-base.EX | 22 ++++++++++++
debian/watch.ex | 22 ++++++++++++
17 files changed, 183 insertions(+)
diff --git a/debian/README.Debian b/debian/README.Debian
new file mode 100644
index 0000000..46b5702
--- /dev/null
+++ b/debian/README.Debian
@@ -0,0 +1,6 @@
+tab2mage for Debian
+-------------------
+
+<possible notes regarding this package - if none, delete this file>
+
+ -- Charles Plessy <charles-debian-nospam at plessy.org> Fri, 11 Apr 2008 10:55:53 +0900
diff --git a/debian/TODO b/debian/TODO
new file mode 100644
index 0000000..19e2b58
--- /dev/null
+++ b/debian/TODO
@@ -0,0 +1,41 @@
+t/creator...............ok
+ 1/1 skipped: Class::DBI not installed
+t/daemon................ok
+ 1/1 skipped: MIME::Lite, Archive::Any or Class::DBI not installed
+t/daemon_checker........ok
+ 3/3 skipped: Parent class ArrayExpress::AutoSubmission::Daemon not available.
+t/daemon_exporter.......ok
+ 3/3 skipped: Parent class ArrayExpress::AutoSubmission::Daemon not available.
+t/daemon_mxchecker......ok
+ 1/1 skipped: DBD::mysql not installed, or ArrayExpress::Curator::Daemon superclass unavailable.
+t/daemon_mxexporter.....ok
+ 1/1 skipped: DBD::mysql not installed, or ArrayExpress::Curator::Daemon superclass unavailable.
+t/data_metrics..........ok
+t/database..............ok
+t/datafile..............ok
+ 15/142 skipped: Test::Exception not installed
+t/datafile_parser.......ok
+t/db....................ok
+ 31/31 skipped: Class::DBI not installed
+t/entrez_list...........ok
+t/experiment_checker....ok
+t/fgem..................ok
+t/logger................ok
+t/mage..................ok
+t/mage_defs.............ok
+t/magetab...............ok
+t/magetab_checker.......ok
+t/magetab_datamatrix....ok
+t/magetab_idf...........ok
+t/magetab_sdrf..........ok
+t/magetab_tabfile.......ok
+t/miamexpress...........ok
+ 1/1 skipped: DBI and/or DBD::mysql not installed
+t/qt_list...............ok
+t/report................ok
+t/spreadsheet...........ok
+ 1/1 skipped: Class::DBI not installed
+t/standalone............ok
+t/tab2mage..............ok
+t/tracking..............ok
+ 2/2 skipped: Date::Manip not installed
diff --git a/debian/changelog b/debian/changelog
new file mode 100644
index 0000000..f7dd1da
--- /dev/null
+++ b/debian/changelog
@@ -0,0 +1,6 @@
+tab2mage (20080110-1) unstable; urgency=low
+
+ * Initial release (Closes: #nnnn) <nnnn is the bug number of your ITP>
+
+ -- Charles Plessy <charles-debian-nospam at plessy.org> Fri, 11 Apr 2008 10:55:53 +0900
+
diff --git a/debian/compat b/debian/compat
new file mode 100644
index 0000000..7ed6ff8
--- /dev/null
+++ b/debian/compat
@@ -0,0 +1 @@
+5
diff --git a/debian/control b/debian/control
new file mode 100644
index 0000000..aedcec0
--- /dev/null
+++ b/debian/control
@@ -0,0 +1,19 @@
+Source: tab2mage
+Section: unknown
+Priority: extra
+Maintainer: Charles Plessy <charles-debian-nospam at plessy.org>
+Build-Depends: cdbs, quilt, debhelper (>= 5)
+Standards-Version: 3.7.2
+
+Package: tab2mage
+Architecture: all
+Depends: ${shlibs:Depends}, ${misc:Depends}, ${perl:Depends},
+ libbio-mage-perl, libbio-mage-utils-perl, libwww-perl,
+ libtie-ixhash-perl, liblist-moreutils-perl,
+ libtext-csv-perl, libreadonly-xs-perl, libconfig-yaml-perl,
+ libclass-std-perl, libparse-recdescent-perl
+ libxml-xerces-perl
+Recommends: libdbi-perl, libdbd-mysql-perl
+Suggests: graphviz
+Description: <insert up to 60 chars description>
+ <insert long description, indented with spaces>
diff --git a/debian/copyright b/debian/copyright
new file mode 100644
index 0000000..0cdf2ac
--- /dev/null
+++ b/debian/copyright
@@ -0,0 +1,24 @@
+This package was debianized by Charles Plessy <charles-debian-nospam at plessy.org> on
+Fri, 11 Apr 2008 10:55:53 +0900.
+
+It was downloaded from <url://example.com>
+
+Upstream Author(s):
+
+ <put author's name and email here>
+ <likewise for another author>
+
+Copyright:
+
+ <Copyright (C) YYYY Name OfAuthor>
+ <likewise for another author>
+
+License:
+
+ <Put the license of the package here indented by 4 spaces>
+
+The Debian packaging is (C) 2008, Charles Plessy <charles-debian-nospam at plessy.org> and
+is licensed under the GPL, see `/usr/share/common-licenses/GPL'.
+
+# Please also look if there are files or directories which have a
+# different copyright/license attached and list them here.
diff --git a/debian/cron.d.ex b/debian/cron.d.ex
new file mode 100644
index 0000000..72ae0ca
--- /dev/null
+++ b/debian/cron.d.ex
@@ -0,0 +1,4 @@
+#
+# Regular cron jobs for the tab2mage package
+#
+0 4 * * * root tab2mage_maintenance
diff --git a/debian/dirs b/debian/dirs
new file mode 100644
index 0000000..ca882bb
--- /dev/null
+++ b/debian/dirs
@@ -0,0 +1,2 @@
+usr/bin
+usr/sbin
diff --git a/debian/docs b/debian/docs
new file mode 100644
index 0000000..68eda78
--- /dev/null
+++ b/debian/docs
@@ -0,0 +1,3 @@
+docs/*
+MAGETAB.txt
+README
diff --git a/debian/examples b/debian/examples
new file mode 100644
index 0000000..e39721e
--- /dev/null
+++ b/debian/examples
@@ -0,0 +1 @@
+examples/*
diff --git a/debian/menu.ex b/debian/menu.ex
new file mode 100644
index 0000000..79d910f
--- /dev/null
+++ b/debian/menu.ex
@@ -0,0 +1,2 @@
+?package(tab2mage):needs="X11|text|vc|wm" section="Applications/see-menu-manual"\
+ title="tab2mage" command="/usr/bin/tab2mage"
diff --git a/debian/patches/add-binaries-to-make-install.patch b/debian/patches/add-binaries-to-make-install.patch
new file mode 100644
index 0000000..527371a
--- /dev/null
+++ b/debian/patches/add-binaries-to-make-install.patch
@@ -0,0 +1,14 @@
+Index: tab2mage-20080110/Makefile.PL
+===================================================================
+--- tab2mage-20080110.orig/Makefile.PL 2008-04-14 10:22:36.000000000 +0900
++++ tab2mage-20080110/Makefile.PL 2008-04-14 10:23:23.000000000 +0900
+@@ -40,6 +40,9 @@
+ bin/magetab.pl
+ bin/expt_check.pl
+ bin/convert_to_mcmr.pl
++ bin/mx_add_affy.pl
++ bin/parse_affy.pl
++ bin/t2m_visualize.pl
+ );
+ my @LIBS = qw(xerces-c);
+
diff --git a/debian/patches/series b/debian/patches/series
new file mode 100644
index 0000000..68a745e
--- /dev/null
+++ b/debian/patches/series
@@ -0,0 +1 @@
+add-binaries-to-make-install.patch
diff --git a/debian/rules b/debian/rules
new file mode 100755
index 0000000..4e02705
--- /dev/null
+++ b/debian/rules
@@ -0,0 +1,5 @@
+#!/usr/bin/make -f
+
+include /usr/share/cdbs/1/rules/patchsys-quilt.mk
+include /usr/share/cdbs/1/rules/debhelper.mk
+include /usr/share/cdbs/1/class/perlmodule.mk
diff --git a/debian/tab2mage-default.ex b/debian/tab2mage-default.ex
new file mode 100644
index 0000000..66323c0
--- /dev/null
+++ b/debian/tab2mage-default.ex
@@ -0,0 +1,10 @@
+# Defaults for tab2mage initscript
+# sourced by /etc/init.d/tab2mage
+# installed at /etc/default/tab2mage by the maintainer scripts
+
+#
+# This is a POSIX shell fragment
+#
+
+# Additional options that are passed to the Daemon.
+DAEMON_OPTS=""
diff --git a/debian/tab2mage.doc-base.EX b/debian/tab2mage.doc-base.EX
new file mode 100644
index 0000000..de3b0a0
--- /dev/null
+++ b/debian/tab2mage.doc-base.EX
@@ -0,0 +1,22 @@
+Document: tab2mage
+Title: Debian tab2mage Manual
+Author: <insert document author here>
+Abstract: This manual describes what tab2mage is
+ and how it can be used to
+ manage online manuals on Debian systems.
+Section: unknown
+
+Format: debiandoc-sgml
+Files: /usr/share/doc/tab2mage/tab2mage.sgml.gz
+
+Format: postscript
+Files: /usr/share/doc/tab2mage/tab2mage.ps.gz
+
+Format: text
+Files: /usr/share/doc/tab2mage/tab2mage.text.gz
+
+Format: HTML
+Index: /usr/share/doc/tab2mage/html/index.html
+Files: /usr/share/doc/tab2mage/html/*.html
+
+
diff --git a/debian/watch.ex b/debian/watch.ex
new file mode 100644
index 0000000..91ad073
--- /dev/null
+++ b/debian/watch.ex
@@ -0,0 +1,22 @@
+# Example watch control file for uscan
+# Rename this file to "watch" and then you can run the "uscan" command
+# to check for upstream updates and more.
+# See uscan(1) for format
+
+# Compulsory line, this is a version 3 file
+version=3
+
+# Uncomment to examine a Webpage
+# <Webpage URL> <string match>
+#http://www.example.com/downloads.php tab2mage-(.*)\.tar\.gz
+
+# Uncomment to examine a Webserver directory
+#http://www.example.com/pub/tab2mage-(.*)\.tar\.gz
+
+# Uncommment to examine a FTP server
+#ftp://ftp.example.com/pub/tab2mage-(.*)\.tar\.gz debian uupdate
+
+# Uncomment to find new files on sourceforge, for devscripts >= 2.9
+# http://sf.net/tab2mage/tab2mage-(.*)\.tar\.gz
+
+
--
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