[med-svn] [tab2mage] 09/12: Normalise packaging in SVN
Andreas Tille
tille at debian.org
Sat Dec 30 16:40:41 UTC 2017
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository tab2mage.
commit 415c43c75cbcee9405ab6b7ab21f452bab1c143c
Author: Andreas Tille <tille at debian.org>
Date: Thu Dec 29 23:20:50 2016 +0000
Normalise packaging in SVN
---
debian/README.Debian | 8 --------
debian/compat | 2 +-
debian/control | 50 ++++++++++++++++++++++++++++++---------------
debian/cron.d.ex | 4 ----
debian/menu.ex | 2 --
debian/rules | 5 ++---
debian/source/format | 1 +
debian/tab2mage-default.ex | 10 ---------
debian/tab2mage.doc-base.EX | 22 --------------------
9 files changed, 38 insertions(+), 66 deletions(-)
diff --git a/debian/README.Debian b/debian/README.Debian
deleted file mode 100644
index e62f715..0000000
--- a/debian/README.Debian
+++ /dev/null
@@ -1,8 +0,0 @@
-tab2mage for Debian
--------------------
-
-Preliminary package, do not expect it to work.
-
-<possible notes regarding this package - if none, delete this file>
-
- -- Charles Plessy <charles-debian-nospam at plessy.org> Fri, 11 Apr 2008 10:55:53 +0900
diff --git a/debian/compat b/debian/compat
index 45a4fb7..f599e28 100644
--- a/debian/compat
+++ b/debian/compat
@@ -1 +1 @@
-8
+10
diff --git a/debian/control b/debian/control
index b3620b7..415314a 100644
--- a/debian/control
+++ b/debian/control
@@ -1,22 +1,40 @@
Source: tab2mage
-Section: unknown
-Priority: extra
-Maintainer: Charles Plessy <plessy at debian.org>
-Build-Depends: cdbs, quilt, debhelper (>= 8)
-Standards-Version: 3.9.2
-Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/tab2mage/trunk/
-Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/tab2mage/trunk
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Charles Plessy <plessy at debian.org>
+Section: science
+Priority: optional
+Build-Depends: debhelper (>= 10)
+Standards-Version: 3.9.8
+Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/tab2mage/trunk/
+Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/tab2mage/trunk
Homepage: http://tab2mage.sourceforge.net/
Package: tab2mage
Architecture: all
-Depends: ${shlibs:Depends}, ${misc:Depends}, ${perl:Depends},
- libbio-mage-perl, libbio-mage-utils-perl, libwww-perl,
- libtie-ixhash-perl, liblist-moreutils-perl,
- libtext-csv-perl, libreadonly-xs-perl, libconfig-yaml-perl,
- libclass-std-perl, libparse-recdescent-perl
- libxml-xerces-perl
-Recommends: libdbi-perl, libdbd-mysql-perl
+Depends: ${misc:Depends},
+ ${perl:Depends},
+ libbio-mage-perl,
+ libbio-mage-utils-perl,
+ libwww-perl,
+ libtie-ixhash-perl,
+ liblist-moreutils-perl,
+ libtext-csv-perl,
+ libreadonly-xs-perl,
+ libconfig-yaml-perl,
+ libclass-std-perl,
+ libparse-recdescent-perl,
+ libxml-xerces-perl
+Recommends: libdbi-perl,
+ libdbd-mysql-perl
Suggests: graphviz
-Description: <insert up to 60 chars description>
- <insert long description, indented with spaces>
+Description: submitting large microarray experiment datasets to public repository database
+ Tab2MAGE is a software package written and supported by the ArrayExpress
+ curation team, which aims to ease the process of submitting large
+ microarray experiment datasets to our public repository database. To
+ this end, Tab2MAGE currently includes two tools, the tab2mage.pl script
+ itself, and a data file checking script, expt_check.pl. With these
+ scripts it is possible to perform an initial data file validation
+ against an array design (e.g., in the form of an "Array Description
+ File" or ADF), and then to generate MAGE-ML using these data files
+ alongside a separate spreadsheet providing MIAME-compliant sample
+ annotation.
diff --git a/debian/cron.d.ex b/debian/cron.d.ex
deleted file mode 100644
index 72ae0ca..0000000
--- a/debian/cron.d.ex
+++ /dev/null
@@ -1,4 +0,0 @@
-#
-# Regular cron jobs for the tab2mage package
-#
-0 4 * * * root tab2mage_maintenance
diff --git a/debian/menu.ex b/debian/menu.ex
deleted file mode 100644
index 79d910f..0000000
--- a/debian/menu.ex
+++ /dev/null
@@ -1,2 +0,0 @@
-?package(tab2mage):needs="X11|text|vc|wm" section="Applications/see-menu-manual"\
- title="tab2mage" command="/usr/bin/tab2mage"
diff --git a/debian/rules b/debian/rules
index eaacaa1..912872f 100755
--- a/debian/rules
+++ b/debian/rules
@@ -1,8 +1,7 @@
#!/usr/bin/make -f
-include /usr/share/cdbs/1/rules/patchsys-quilt.mk
-include /usr/share/cdbs/1/rules/debhelper.mk
-include /usr/share/cdbs/1/class/perlmodule.mk
+%:
+ dh $@
get-orig-source:
mkdir -p ../tarballs
diff --git a/debian/source/format b/debian/source/format
new file mode 100644
index 0000000..163aaf8
--- /dev/null
+++ b/debian/source/format
@@ -0,0 +1 @@
+3.0 (quilt)
diff --git a/debian/tab2mage-default.ex b/debian/tab2mage-default.ex
deleted file mode 100644
index 66323c0..0000000
--- a/debian/tab2mage-default.ex
+++ /dev/null
@@ -1,10 +0,0 @@
-# Defaults for tab2mage initscript
-# sourced by /etc/init.d/tab2mage
-# installed at /etc/default/tab2mage by the maintainer scripts
-
-#
-# This is a POSIX shell fragment
-#
-
-# Additional options that are passed to the Daemon.
-DAEMON_OPTS=""
diff --git a/debian/tab2mage.doc-base.EX b/debian/tab2mage.doc-base.EX
deleted file mode 100644
index de3b0a0..0000000
--- a/debian/tab2mage.doc-base.EX
+++ /dev/null
@@ -1,22 +0,0 @@
-Document: tab2mage
-Title: Debian tab2mage Manual
-Author: <insert document author here>
-Abstract: This manual describes what tab2mage is
- and how it can be used to
- manage online manuals on Debian systems.
-Section: unknown
-
-Format: debiandoc-sgml
-Files: /usr/share/doc/tab2mage/tab2mage.sgml.gz
-
-Format: postscript
-Files: /usr/share/doc/tab2mage/tab2mage.ps.gz
-
-Format: text
-Files: /usr/share/doc/tab2mage/tab2mage.text.gz
-
-Format: HTML
-Index: /usr/share/doc/tab2mage/html/index.html
-Files: /usr/share/doc/tab2mage/html/*.html
-
-
--
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