[med-svn] [libseqlib] branch master updated (3ba4b92 -> c806b9e)

[Andreas Tille]

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tille pushed a change to branch master
in repository libseqlib.

      from  3ba4b92   Hardening
       new  9e717de   Remove smith-waterman code copy in favour of according package
       new  ff988fa   New upstream version 1.1.1+dfsg
       new  3584015   Merge tag 'upstream/1.1.1+dfsg'
       new  c806b9e   Use Debian packaged ssw

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Summary of changes:
 SeqLib/ssw.h                                       | 188 -----
 SeqLib/ssw_cpp.h                                   | 219 -----
 debian/control                                     |   3 +-
 debian/copyright                                   |   1 +
 debian/patches/series                              |   1 +
 ...jsoncpp.patch => use_debian_packaged_ssw.patch} |  39 +-
 src/ssw.c                                          | 884 ---------------------
 src/ssw_cpp.cpp                                    | 477 -----------
 8 files changed, 28 insertions(+), 1784 deletions(-)
 delete mode 100644 SeqLib/ssw.h
 delete mode 100644 SeqLib/ssw_cpp.h
 copy debian/patches/{use_debian_packaged_jsoncpp.patch => use_debian_packaged_ssw.patch} (61%)
 delete mode 100644 src/ssw.c
 delete mode 100644 src/ssw_cpp.cpp

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