[med-svn] [diamond-aligner] branch master updated (1ae1467 -> c373427)

[Andreas Tille]

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tille pushed a change to branch master
in repository diamond-aligner.

      from  1ae1467   Drop -march=native flag
       new  b84b9ff   New upstream version 0.8.35+dfsg
       new  4700319   Merge tag 'upstream/0.8.35+dfsg'
       new  c373427   New upstream version build also on 32bit arch

The 3 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
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Summary of changes:
 README.rst                           |  2 +-
 debian/changelog                     |  6 ++++--
 debian/doc-base                      | 13 ------------
 src/ChangeLog                        |  5 +++++
 src/basic/basic.cpp                  |  2 +-
 src/basic/const.h                    |  2 +-
 src/basic/shape.h                    |  1 +
 src/data/load_seqs.h                 |  2 +-
 src/data/reference.cpp               | 41 ++++++++++++++++++++++--------------
 src/data/reference.h                 | 12 ++++++-----
 src/data/seed_histogram.h            |  8 +++----
 src/data/string_set.h                |  2 +-
 src/extra/model_sim.cpp              |  5 +++--
 src/extra/opt.cpp                    | 17 ++++++++++++++-
 src/extra/roc.cpp                    |  2 +-
 src/output/blast_pairwise_format.cpp |  4 ++--
 src/util/binary_file.h               |  5 +++++
 src/util/text_buffer.h               |  2 +-
 src/util/util.h                      | 10 +++------
 19 files changed, 82 insertions(+), 59 deletions(-)
 delete mode 100644 debian/doc-base

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