[med-svn] [diamond-aligner] 02/03: Merge tag 'upstream/0.8.35+dfsg'

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a commit to branch master
in repository diamond-aligner.

commit 47003191f74f1ad77f89351d9bf117520c6b3f69
Merge: 1ae1467 b84b9ff
Author: Andreas Tille <tille at debian.org>
Date:   Fri Feb 3 21:40:24 2017 +0100

    Merge tag 'upstream/0.8.35+dfsg'
    
    Upstream version 0.8.35+dfsg

 README.rst                           |  2 +-
 src/ChangeLog                        |  5 +++++
 src/basic/basic.cpp                  |  2 +-
 src/basic/const.h                    |  2 +-
 src/basic/shape.h                    |  1 +
 src/data/load_seqs.h                 |  2 +-
 src/data/reference.cpp               | 41 ++++++++++++++++++++++--------------
 src/data/reference.h                 | 12 ++++++-----
 src/data/seed_histogram.h            |  8 +++----
 src/data/string_set.h                |  2 +-
 src/extra/model_sim.cpp              |  5 +++--
 src/extra/opt.cpp                    | 17 ++++++++++++++-
 src/extra/roc.cpp                    |  2 +-
 src/output/blast_pairwise_format.cpp |  4 ++--
 src/util/binary_file.h               |  5 +++++
 src/util/text_buffer.h               |  2 +-
 src/util/util.h                      | 10 +++------
 17 files changed, 78 insertions(+), 44 deletions(-)

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/diamond-aligner.git