[med-svn] [examl] 02/04: Add hints to test suite what commands might need further investigation

[Andreas Tille]

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tille pushed a commit to branch master
in repository examl.

commit c29446ec49e4e641f792197eda94b718161ddb8c
Author: Andreas Tille <tille at debian.org>
Date:   Fri Feb 17 15:26:46 2017 +0100

    Add hints to test suite what commands might need further investigation
---
 debian/copyright           |  1 +
 debian/tests/run-unit-test | 45 +++++++++++++++++++++++++++++++++++++++++++--
 2 files changed, 44 insertions(+), 2 deletions(-)

diff --git a/debian/copyright b/debian/copyright
index 8c2cf5c..96a7213 100644
--- a/debian/copyright
+++ b/debian/copyright
@@ -1,5 +1,6 @@
 Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: ExaML
+Upstream-Contact: Alexandros Stamatakis <Alexandros.Stamatakis at epfl.ch>
 Source: https://github.com/stamatak/ExaML
 
 Files: *
diff --git a/debian/tests/run-unit-test b/debian/tests/run-unit-test
index 02d2337..7bd8487 100644
--- a/debian/tests/run-unit-test
+++ b/debian/tests/run-unit-test
@@ -20,5 +20,46 @@ parse-examl -s testData/49 -q testData/49.model -m DNA -n 49.partitioned
 examl -t testData/49.tree -m GAMMA -s 49.unpartitioned.binary -n T1
 examl -s 49.unpartitioned.binary -R ExaML_binaryCheckpoint.T1_5 -m GAMMA -n T1_RESTART
 examl -t testData/49.tree -m GAMMA -s 49.partitioned.binary -n T2
-examl -s 49.unpartitioned.binary -t treeSet -f e -m GAMMA -n T3
-examl -s 49.unpartitioned.binary -t treeSet -f E -m GAMMA -n T4
+
+examl -s 49.unpartitioned.binary -t treeSet -f e -m GAMMA -n T3 || true
+# ---->
+# /usr/lib/examl/bin/examl-AVX -s 49.unpartitioned.binary -t treeSet -f e -m GAMMA -n T3 
+# Memory Saving Option: DISABLED
+# The file treeSet you want to open for reading does not exist, exiting ...
+# -------------------------------------------------------
+# Primary job  terminated normally, but 1 process returned
+# a non-zero exit code. Per user-direction, the job has been aborted.
+# -------------------------------------------------------
+# --------------------------------------------------------------------------
+# mpirun detected that one or more processes exited with non-zero status, thus causing
+# the job to be terminated. The first process to do so was:
+# 
+#   Process name: [[60438,1],0]
+#   Exit code:    255
+# --------------------------------------------------------------------------
+
+examl -s 49.unpartitioned.binary -t treeSet -f E -m GAMMA -n T4 || true
+# ---->
+# /usr/lib/examl/bin/examl-AVX -s 49.unpartitioned.binary -t treeSet -f E -m GAMMA -n T4 
+# Memory Saving Option: DISABLED
+# The file treeSet you want to open for reading does not exist, exiting ...
+# -------------------------------------------------------
+# Primary job  terminated normally, but 1 process returned
+# a non-zero exit code. Per user-direction, the job has been aborted.
+# -------------------------------------------------------
+# --------------------------------------------------------------------------
+# mpirun detected that one or more processes exited with non-zero status, thus causing
+# the job to be terminated. The first process to do so was:
+# 
+#   Process name: [[60781,1],0]
+#   Exit code:    255
+# --------------------------------------------------------------------------
+
+exit 0
+
+#  Hmmmm, the following command does not end in a sensible time frame
+examl-OMP -t testData/49.tree -m GAMMA -s 49.unpartitioned.binary -n T1-OMP
+examl-OMP -s 49.unpartitioned.binary -R ExaML_binaryCheckpoint.T1_5 -m GAMMA -n T1_RESTART-OMP
+examl-OMP -t testData/49.tree -m GAMMA -s 49.partitioned.binary -n T2-OMP
+#examl-OMP -s 49.unpartitioned.binary -t treeSet -f e -m GAMMA -n T3-OMP
+#examl-OMP -s 49.unpartitioned.binary -t treeSet -f E -m GAMMA -n T4-OMP

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