[med-svn] [deepnano] 03/04: changed testsuite for poretools-data dependency

[Çağrı ULAŞ]

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cagriulas-guest pushed a commit to branch master
in repository deepnano.

commit a92322e4e49f372aa799e228cd1082d95f69ee0c
Author: Çağrı ULAŞ <cagriulas at gmail.com>
Date:   Wed Feb 22 01:57:45 2017 +0300

    changed testsuite for poretools-data dependency
---
 debian/tests/control     | 2 +-
 debian/tests/run-test.sh | 5 ++++-
 2 files changed, 5 insertions(+), 2 deletions(-)

diff --git a/debian/tests/control b/debian/tests/control
index a4ece15..92f05ce 100644
--- a/debian/tests/control
+++ b/debian/tests/control
@@ -1,3 +1,3 @@
 Tests: run-test.sh
-Depends: @, deepnano-data
+Depends: @, deepnano-data, poretools-data
 Restrictions: allow-stderr
diff --git a/debian/tests/run-test.sh b/debian/tests/run-test.sh
index 7b7aaf6..24d71dc 100644
--- a/debian/tests/run-test.sh
+++ b/debian/tests/run-test.sh
@@ -10,10 +10,13 @@ if [ "$AUTOPKGTEST_TMP" = "" ] ; then
 fi
 
 cp -a /usr/share/${test_required_pkg}/* $AUTOPKGTEST_TMP
+mkdir -p $AUTOPKGTEST_TMP/test_data/
+cp -a /usr/share/poretools/data/* $AUTOPKGTEST_TMP/test_data/
 
 cd $AUTOPKGTEST_TMP
 find . -name "*gz" -exec gunzip \{\} \;
-
+echo !!!!!!!!!!
+ls -R
 echo -e "\n#1 - deepnano_basecall"
 OMP_NUM_THREADS=`nproc` deepnano_basecall test_data/*
 cat output.fasta

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