[med-svn] [ncbi-vdb] 04/04: Refresh patches

[Andreas Tille]

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tille pushed a commit to branch master
in repository ncbi-vdb.

commit c9a9ef2d331fb254b141a3cadc125510f969c83e
Author: Andreas Tille <tille at debian.org>
Date:   Wed Jan 11 07:19:52 2017 +0100

    Refresh patches
---
 debian/patches/find_hdf5_serial.patch | 2 +-
 debian/patches/find_ngs-sdk.patch     | 4 ++--
 debian/patches/spelling.patch         | 2 +-
 3 files changed, 4 insertions(+), 4 deletions(-)

diff --git a/debian/patches/find_hdf5_serial.patch b/debian/patches/find_hdf5_serial.patch
index 9fe7178..2d1f423 100644
--- a/debian/patches/find_hdf5_serial.patch
+++ b/debian/patches/find_hdf5_serial.patch
@@ -6,7 +6,7 @@ Description: use hdf5 serial
 
 --- a/setup/konfigure.perl
 +++ b/setup/konfigure.perl
-@@ -1485,8 +1485,8 @@ sub check_compiler {
+@@ -1488,8 +1488,8 @@ sub check_compiler {
              $flags = $n;
              $log = '                      int main() {                     }\n'
          } elsif ($n eq 'hdf5') {
diff --git a/debian/patches/find_ngs-sdk.patch b/debian/patches/find_ngs-sdk.patch
index 0fb6ac3..0ebb192 100644
--- a/debian/patches/find_ngs-sdk.patch
+++ b/debian/patches/find_ngs-sdk.patch
@@ -4,7 +4,7 @@ Description: Enable finding ngs-sdk
 
 --- a/setup/konfigure.perl
 +++ b/setup/konfigure.perl
-@@ -1310,7 +1310,9 @@ sub find_in_dir {
+@@ -1313,7 +1313,9 @@ sub find_in_dir {
          print "\tlibraries... " unless ($AUTORUN);
          if ($lib) {
              my $builddir = File::Spec->catdir($dir, $OS, $TOOLS, $ARCH, $BUILD);
@@ -15,7 +15,7 @@ Description: Enable finding ngs-sdk
              my $ilibdir = File::Spec->catdir($builddir, 'ilib');
              my $f = File::Spec->catdir($libdir, $lib);
              print "\n\t\tchecking $f\n\t" if ($OPT{'debug'});
-@@ -1391,8 +1393,8 @@ sub find_in_dir {
+@@ -1394,8 +1396,8 @@ sub find_in_dir {
          }
      }
      if ($jar) {
diff --git a/debian/patches/spelling.patch b/debian/patches/spelling.patch
index 6678d2f..10da9eb 100644
--- a/debian/patches/spelling.patch
+++ b/debian/patches/spelling.patch
@@ -4,7 +4,7 @@ Description: Fix some spelling issues
 
 --- a/libs/krypto/encfilev2.c
 +++ b/libs/krypto/encfilev2.c
-@@ -970,7 +970,7 @@ rc_t KEncFileBlockRead (KEncFile * self,
+@@ -971,7 +971,7 @@ rc_t KEncFileBlockRead (KEncFile * self,
  
                      PLOGERR (klogErr, (klogErr, vrc, "read missing block at "
                                         "block number '$(I)' encrypted position "

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