[med-svn] [iva] branch master updated (5a57b3c -> 972c7d6)

[Sascha Steinbiss]

This is an automated email from the git hooks/post-receive script.

satta pushed a change to branch master
in repository iva.

      from  5a57b3c   disable multithreaded test
       new  83186eb   New upstream version 1.0.8+ds
       new  3030a5f   Merge tag 'upstream/1.0.8+ds'
       new  972c7d6   new version; drop patches

The 3 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 debian/changelog                                         |  7 +++++++
 debian/patches/series                                    |  2 --
 iva/common.py                                            |  2 +-
 iva/gage/getMummerStats.sh                               |  2 ++
 iva/kraken.py                                            | 16 ++++++++++++++++
 .../NC_123456.embl => kraken_count_cds_from_embl.0}      |  7 -------
 .../NC_123456.embl => kraken_count_cds_from_embl.1}      |  0
 .../NC_123456.embl => kraken_count_cds_from_embl.2}      | 10 ++++++++++
 iva/tests/kraken_test.py                                 |  9 ++++++++-
 scripts/iva_qc_make_db                                   |  2 +-
 setup.py                                                 |  2 +-
 11 files changed, 46 insertions(+), 13 deletions(-)
 copy iva/tests/data/{qc_test.dummy.embl/NC_123456.embl => kraken_count_cds_from_embl.0} (72%)
 copy iva/tests/data/{qc_test.dummy.embl/NC_123456.embl => kraken_count_cds_from_embl.1} (100%)
 copy iva/tests/data/{qc_test.dummy.embl/NC_123456.embl => kraken_count_cds_from_embl.2} (73%)

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