[med-svn] [freebayes] 03/06: Add missing -lbamtools

[Andreas Tille]

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tille pushed a commit to branch master
in repository freebayes.

commit 2577b18b23eb80c08713bcd50a12491f5ad469c4
Author: Andreas Tille <tille at debian.org>
Date:   Tue Nov 8 11:39:04 2016 +0100

    Add missing -lbamtools
---
 debian/patches/use_debian_packaged_bamtools.patch | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/debian/patches/use_debian_packaged_bamtools.patch b/debian/patches/use_debian_packaged_bamtools.patch
index 097649c..a420cf1 100644
--- a/debian/patches/use_debian_packaged_bamtools.patch
+++ b/debian/patches/use_debian_packaged_bamtools.patch
@@ -46,7 +46,7 @@ Description: Use Debian packaged bamtools
 -bamleftalign ../bin/bamleftalign: $(BAMTOOLS_ROOT)/lib/libbamtools.a bamleftalign.o Fasta.o LeftAlign.o IndelAllele.o split.o
 -	$(CXX) $(CFLAGS) $(INCLUDE) bamleftalign.o Fasta.o LeftAlign.o IndelAllele.o split.o $(BAMTOOLS_ROOT)/lib/libbamtools.a -o ../bin/bamleftalign $(LIBS)
 +bamleftalign ../bin/bamleftalign: bamleftalign.o Fasta.o
-+	$(CXX) $(CFLAGS) $(INCLUDE) bamleftalign.o Fasta.o LeftAlign.o IndelAllele.o split.o
++	$(CXX) $(CFLAGS) $(INCLUDE) bamleftalign.o Fasta.o LeftAlign.o IndelAllele.o split.o -lbamtools
  
 -bamfiltertech ../bin/bamfiltertech: $(BAMTOOLS_ROOT)/lib/libbamtools.a bamfiltertech.o $(OBJECTS) $(HEADERS)
 +bamfiltertech ../bin/bamfiltertech: bamfiltertech.o $(OBJECTS) $(HEADERS)

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