[med-svn] [python-galaxyxml] 02/11: Initial commit
Andreas Tille
tille at debian.org
Sat Jan 14 14:55:22 UTC 2017
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository python-galaxyxml.
commit 7c67e8d5864e7c294b5bb14c6c3a4c7e26dbcf7a
Author: Anton Khodak <anton.khodak at ukr.net>
Date: Sat Jan 14 15:44:13 2017 +0200
Initial commit
---
0.1.tar.gz | Bin 0 -> 7225 bytes
debian/changelog | 5 ++++
debian/compat | 1 +
debian/control | 37 ++++++++++++++++++++++++++
debian/copyright | 11 ++++++++
debian/doc-base | 20 ++++++++++++++
debian/get-orig-source | 55 +++++++++++++++++++++++++++++++++++++++
debian/rules | 27 +++++++++++++++++++
debian/source/format | 1 +
debian/upstream/metadata | 12 +++++++++
debian/watch | 4 +++
python-galaxyxml_0.1.orig.tar.gz | 1 +
12 files changed, 174 insertions(+)
diff --git a/0.1.tar.gz b/0.1.tar.gz
new file mode 100644
index 0000000..9e4d8f5
Binary files /dev/null and b/0.1.tar.gz differ
diff --git a/debian/changelog b/debian/changelog
new file mode 100644
index 0000000..4c7e183
--- /dev/null
+++ b/debian/changelog
@@ -0,0 +1,5 @@
+python-galaxyxml (0.1-1) UNRELEASED; urgency=medium
+
+ * Initial release (Closes: #<bug>)
+
+ -- Anton Khodak <anton.khodak at ukr.net> Sat, 14 Jan 2017 14:03:27 +0200
diff --git a/debian/compat b/debian/compat
new file mode 100644
index 0000000..ec63514
--- /dev/null
+++ b/debian/compat
@@ -0,0 +1 @@
+9
diff --git a/debian/control b/debian/control
new file mode 100644
index 0000000..842e2af
--- /dev/null
+++ b/debian/control
@@ -0,0 +1,37 @@
+Source: python-galaxyxml
+Section: science
+Priority: optional
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Anton Khodak <anton.khodak at ukr.net>
+Build-Depends: debhelper (>= 9), python-lxml, python3-lxml
+Standards-Version: 3.9.8
+Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/python-galaxyxml.git
+Vcs-Git: https://anonscm.debian.org/git/debian-med/python-galaxyxml.git
+Homepage: https://github.com/erasche/galaxyxml
+
+Package: python-galaxyxml
+Architecture: any
+Depends: ${shlibs:Depends}, ${misc:Depends}
+Description: XML Generation libraries for Galaxy Tool/ToolDeps XML
+ These libraries will support building of Tool XML and Tool Dependencies XML.
+ .
+ This is a Python 2 package.
+
+Source: python3-galaxyxml
+Section: science
+Priority: optional
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Anton Khodak <anton.khodak at ukr.net>
+Build-Depends: debhelper (>= 9), python-lxml, python3-lxml
+Standards-Version: 3.9.8
+Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/python3-galaxyxml.git
+Vcs-Git: https://anonscm.debian.org/git/debian-med/python3-galaxyxml.git
+Homepage: https://github.com/erasche/galaxyxml
+
+Package: python-galaxyxml
+Architecture: any
+Depends: ${shlibs:Depends}, ${misc:Depends}
+Description: XML Generation libraries for Galaxy Tool/ToolDeps XML
+ These libraries will support building of Tool XML and Tool Dependencies XML.
+ .
+ This is a Python 3 package.
diff --git a/debian/copyright b/debian/copyright
new file mode 100644
index 0000000..3416315
--- /dev/null
+++ b/debian/copyright
@@ -0,0 +1,11 @@
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: <pkg>
+Source: <path_to_download>
+
+Files: *
+Copyright: © 20xx-20yy <upstream>
+License: <license>
+
+Files: debian/*
+Copyright: © 2016 maintainername <maintainer at e.mail>
+License: <license>
diff --git a/debian/doc-base b/debian/doc-base
new file mode 100644
index 0000000..5e7e1d4
--- /dev/null
+++ b/debian/doc-base
@@ -0,0 +1,20 @@
+Document: <pkg>
+Title: <title for this doc>
+Author: <author of this doc>
+Abstract: <if you have no better clue the short and
+ long description from debian/control might fit here as well>
+Section: Science/{Biology,Medicine} # see /usr/share/doc/doc-base/doc-base.txt.gz "2.3.3. The `section' field"
+
+# pick one of the below options
+Format: Text
+Files: /usr/share/doc/<pkg>/<pkg>.txt.gz
+
+Format: html
+Index: /usr/share/doc/<pkg>/html/index.html
+Files: /usr/share/doc/<pkg>/html/*
+
+Format: pdf
+Files: /usr/share/doc/<pkg>/<pkg>.pdf.gz
+
+Format: postscript
+Files: /usr/share/doc/<pkg>/<pkg>.ps.gz
diff --git a/debian/get-orig-source b/debian/get-orig-source
new file mode 100755
index 0000000..2aa782f
--- /dev/null
+++ b/debian/get-orig-source
@@ -0,0 +1,55 @@
+#!/bin/sh
+# if you need to repack for whatever reason you can
+# use this script via uscan or directly
+#
+# FIXME: currently the code is not conform to Debian Policy
+# http://www.debian.org/doc/debian-policy/ch-source.html
+# "get-orig-source (optional)"
+# This target may be invoked in any directory, ...
+# --> currently it is assumed the script is called in the
+# source directory featuring the debian/ dir
+
+# Excluding files and repacking archives
+# --------------------------------------
+# See also mk-origtargz(1) and the --repack option to uscan(1), which
+# honor the Files-Excluded list in debian/copyright.
+# That may be all you need, especially since the repack option can be set
+# in debian/watch.
+
+# For an example how to fetch source from sourceforge SVN see
+# https://anonscm.debian.org/git/debian-med/kmer-tools.git
+
+COMPRESS=xz
+
+set -e
+NAME=`dpkg-parsechangelog | awk '/^Source/ { print $2 }'`
+
+if ! echo $@ | grep -q upstream-version ; then
+ VERSION=`dpkg-parsechangelog | awk '/^Version:/ { print $2 }' | sed 's/\([0-9\.]\+\)-[0-9]\+$/\1/'`
+ uscan --force-download
+else
+ VERSION=`echo $@ | sed "s?^.*--upstream-version \([0-9.]\+\) .*${NAME}.*?\1?"`
+ if echo "$VERSION" | grep -q "upstream-version" ; then
+ echo "Unable to parse version number"
+ exit
+ fi
+fi
+
+TARDIR=${NAME}-${VERSION}
+mkdir -p ../tarballs
+cd ../tarballs
+# need to clean up the tarballs dir first because upstream tarball might
+# contain a directory with unpredictable name
+rm -rf *
+tar -xaf ../${TARDIR}.tar.gz
+
+UPSTREAMTARDIR=`find . -mindepth 1 -maxdepth 1 -type d`
+if [ "${UPSTREAMTARDIR}" != "${TARDIR}" ] ; then
+ mv "${UPSTREAMTARDIR}" "${TARDIR}"
+fi
+
+# Remove useless binaries
+# ... do something which needs to be done ...
+
+GZIP="--best --no-name" tar --owner=root --group=root --mode=a+rX -caf "$NAME"_"$VERSION".orig.tar.${COMPRESS} "${TARDIR}"
+rm -rf ${TARDIR}
diff --git a/debian/rules b/debian/rules
new file mode 100755
index 0000000..2199111
--- /dev/null
+++ b/debian/rules
@@ -0,0 +1,27 @@
+#!/usr/bin/make -f
+
+# DH_VERBOSE := 1
+export LC_ALL=C.UTF-8
+
+# some helpful variables - uncomment them if needed
+# shamelessly stolen from http://jmtd.net/log/awk/
+#DEBVERS := $(shell dpkg-parsechangelog | awk '/^Version:/ {print $$2}')
+#VERSION := $(shell echo '$(DEBVERS)' | sed -e 's/^[0-9]*://' -e 's/-.*//')
+#DEBFLAVOR := $(shell dpkg-parsechangelog | awk '/^Distribution:/ {print $$2}')
+#DEBPKGNAME := $(shell dpkg-parsechangelog | awk '/^Source:/ {print $$2}')
+#DEBIAN_BRANCH := $(shell awk 'BEGIN{FS="[= ]+"} /debian-branch/ {print $$2}' debian/gbp.conf)
+#GIT_TAG := $(subst ~,_,$(VERSION))
+
+# alternatively to manually set those variables, you can
+# include /usr/share/dpkg/default.mk
+# and use what is set there.
+
+# for hardening you might like to uncomment this:
+# export DEB_BUILD_MAINT_OPTIONS=hardening=+all
+
+export PYBUILD_NAME=galaxyxml
+%:
+ dh $@ --with python2,python3 --buildsystem=pybuild
+
+#get-orig-source:
+# . debian/get-orig-source
diff --git a/debian/source/format b/debian/source/format
new file mode 100644
index 0000000..163aaf8
--- /dev/null
+++ b/debian/source/format
@@ -0,0 +1 @@
+3.0 (quilt)
diff --git a/debian/upstream/metadata b/debian/upstream/metadata
new file mode 100644
index 0000000..d8b5812
--- /dev/null
+++ b/debian/upstream/metadata
@@ -0,0 +1,12 @@
+Reference:
+ Author:
+ Title:
+ Journal:
+ Year:
+ Volume:
+ Number:
+ Pages:
+ DOI:
+ PMID:
+ URL:
+ eprint:
diff --git a/debian/watch b/debian/watch
new file mode 100644
index 0000000..9b0a25e
--- /dev/null
+++ b/debian/watch
@@ -0,0 +1,4 @@
+version=4
+
+https://github.com/erasche/galaxyxml/releases .*/archive/(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz)
+
diff --git a/python-galaxyxml_0.1.orig.tar.gz b/python-galaxyxml_0.1.orig.tar.gz
new file mode 120000
index 0000000..1fafd7d
--- /dev/null
+++ b/python-galaxyxml_0.1.orig.tar.gz
@@ -0,0 +1 @@
+0.1.tar.gz
\ No newline at end of file
--
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