[med-svn] [plink1.9] branch master updated (0a64ec8 -> 026f950)

[Dylan Aïssi]

This is an automated email from the git hooks/post-receive script.

bob.dybian-guest pushed a change to branch master
in repository plink1.9.

      from  0a64ec8   Upload to unstable
       new  0cc4cbb   Imported Upstream version 1.90~b3.45-170113
       new  02d65ea   Merge tag 'upstream/1.90_b3.45-170113'
       new  9fc2cc9   Update d/*changelogs
       new  b979bc2   Refresh patch
       new  2c55270   Update d/copyright
       new  026f950   Finalize d/changelog

The 6 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 Makefile                                |   6 +-
 debian/changelog                        |   8 +++
 debian/copyright                        |  12 ++--
 debian/patches/01.Makefile_config.patch |  12 ++--
 debian/upstream.changelog               |  16 ++---
 pigz.c                                  |   4 +-
 plink.c                                 |  41 +++++++------
 plink_assoc.c                           |   2 +-
 plink_assoc.h                           |   2 +-
 plink_calc.c                            |   2 +-
 plink_cluster.c                         |   2 +-
 plink_cnv.c                             |   2 +-
 plink_cnv.h                             |   2 +-
 plink_common.c                          |  12 +++-
 plink_common.h                          |  79 ++++++++++++------------
 plink_data.c                            | 104 +++++++++++++++++++++++++-------
 plink_data.h                            |   2 +-
 plink_dosage.c                          |   2 +-
 plink_dosage.h                          |   2 +-
 plink_family.c                          |   2 +-
 plink_family.h                          |   2 +-
 plink_filter.c                          |   2 +-
 plink_filter.h                          |   2 +-
 plink_first_compile                     |  10 +--
 plink_glm.c                             |   4 +-
 plink_glm.h                             |   2 +-
 plink_help.c                            |  16 +++--
 plink_help.h                            |   2 +-
 plink_homozyg.c                         |   2 +-
 plink_homozyg.h                         |   2 +-
 plink_lasso.c                           |   2 +-
 plink_lasso.h                           |   2 +-
 plink_ld.c                              |   8 ++-
 plink_ld.h                              |   2 +-
 plink_matrix.c                          |   6 +-
 plink_matrix.h                          |   2 +-
 plink_misc.c                            |   2 +-
 plink_misc.h                            |   2 +-
 plink_perm.c                            |   2 +-
 plink_perm.h                            |   2 +-
 plink_rserve.c                          |   2 +-
 plink_rserve.h                          |   2 +-
 plink_set.c                             |   2 +-
 plink_set.h                             |   2 +-
 plink_stats.c                           |   2 +-
 plink_stats.h                           |   2 +-
 46 files changed, 245 insertions(+), 155 deletions(-)

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/plink1.9.git