[med-svn] [ariba] branch master updated (ed402d0 -> fac2e5a)

[Sascha Steinbiss]

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satta pushed a change to branch master
in repository ariba.

      from  ed402d0   new Debian version
       new  f663204   new upstream version
       new  5ee95ba   New upstream version 2.7.0+ds
       new  fac2e5a   Merge tag 'upstream/2.7.0+ds'

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repository and will be described in separate emails.  The revisions
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Summary of changes:
 ariba/__init__.py                                  |   2 +
 ariba/common.py                                    |  25 +++++
 ariba/megares_data_finder.py                       |  68 ++++++++++++
 ariba/megares_zip_parser.py                        | 119 +++++++++++++++++++++
 ariba/ref_genes_getter.py                          |  38 +++----
 .../data/megares_zip_parse_extract_files_ok.zip    | Bin 0 -> 1328 bytes
 ...megares_zip_parse_extract_files_one_missing.zip | Bin 0 -> 1116 bytes
 .../data/megares_zip_parser_load_annotations.csv   |   3 +
 .../megares_zip_parser_load_header_mappings.tsv    |   3 +
 .../data/megares_zip_parser_write_files.expect.fa  |   6 ++
 .../data/megares_zip_parser_write_files.expect.tsv |   3 +
 .../megares_annotations_v1.01.csv                  |   4 +
 .../megares_database_v1.01.fasta                   |   6 ++
 .../megares_to_external_header_mappings_v1.01.tsv  |   4 +
 ariba/tests/megares_data_finder_test.py            |  36 +++++++
 ariba/tests/megares_zip_parser_test.py             |  84 +++++++++++++++
 debian/changelog                                   |   7 ++
 debian/control                                     |   1 +
 scripts/ariba                                      |   2 +-
 setup.py                                           |   3 +-
 20 files changed, 393 insertions(+), 21 deletions(-)
 create mode 100644 ariba/megares_data_finder.py
 create mode 100644 ariba/megares_zip_parser.py
 create mode 100644 ariba/tests/data/megares_zip_parse_extract_files_ok.zip
 create mode 100644 ariba/tests/data/megares_zip_parse_extract_files_one_missing.zip
 create mode 100644 ariba/tests/data/megares_zip_parser_load_annotations.csv
 create mode 100644 ariba/tests/data/megares_zip_parser_load_header_mappings.tsv
 create mode 100644 ariba/tests/data/megares_zip_parser_write_files.expect.fa
 create mode 100644 ariba/tests/data/megares_zip_parser_write_files.expect.tsv
 create mode 100644 ariba/tests/data/megares_zip_parser_write_files/megares_annotations_v1.01.csv
 create mode 100644 ariba/tests/data/megares_zip_parser_write_files/megares_database_v1.01.fasta
 create mode 100644 ariba/tests/data/megares_zip_parser_write_files/megares_to_external_header_mappings_v1.01.tsv
 create mode 100644 ariba/tests/megares_data_finder_test.py
 create mode 100644 ariba/tests/megares_zip_parser_test.py

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