[med-svn] [dazzdb] 03/05: Refresh and update patches

[Afif Elghraoui]

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afif pushed a commit to branch master
in repository dazzdb.

commit 126b62b39e8c468c924044cfdc728d657e9f52d5
Author: Afif Elghraoui <afif at debian.org>
Date:   Wed Jan 18 22:34:58 2017 -0800

    Refresh and update patches
---
 debian/patches/append-cflags.patch  |  2 +-
 debian/patches/compiler-flags.patch | 22 +++++++++++++++-------
 debian/patches/destdir.patch        |  2 +-
 3 files changed, 17 insertions(+), 9 deletions(-)

diff --git a/debian/patches/append-cflags.patch b/debian/patches/append-cflags.patch
index d4b7fa8..fa89723 100644
--- a/debian/patches/append-cflags.patch
+++ b/debian/patches/append-cflags.patch
@@ -11,4 +11,4 @@ Last-Update: 2015-09-13
 +CFLAGS += -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing
  
  ALL = fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm simulator \
-       fasta2DAM DAM2fasta DBdump rangen
+       fasta2DAM DAM2fasta DBdump rangen arrow2DB DB2arrow DBwipe
diff --git a/debian/patches/compiler-flags.patch b/debian/patches/compiler-flags.patch
index 028ba2b..208f40f 100644
--- a/debian/patches/compiler-flags.patch
+++ b/debian/patches/compiler-flags.patch
@@ -1,18 +1,18 @@
 Description: Honor LDFLAGS in upstream Makefile
-Author: Afif Elghraoui <afif at ghraoui.name>
+Author: Afif Elghraoui <afif at debian.org>
 Forwarded: no
-Last-Update: 2015-09-13
+Last-Update: 2017-01-18
 --- dazzdb.orig/Makefile
 +++ dazzdb/Makefile
 @@ -1,6 +1,7 @@
  DEST_DIR = ~/bin
  
  CFLAGS += -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing
-+LDLIBS += -lm
++LDLIBS = -lm
  
  ALL = fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm simulator \
-       fasta2DAM DAM2fasta DBdump rangen
-@@ -8,49 +9,35 @@
+       fasta2DAM DAM2fasta DBdump rangen arrow2DB DB2arrow DBwipe
+@@ -8,55 +9,41 @@
  all: $(ALL)
  
  fasta2DB: fasta2DB.c DB.c DB.h QV.c QV.h
@@ -28,6 +28,14 @@ Last-Update: 2015-09-13
  DB2quiva: DB2quiva.c DB.c DB.h QV.c QV.h
 -	gcc $(CFLAGS) -o DB2quiva DB2quiva.c DB.c QV.c -lm
  
++DB2arrow: LDLIBS = -lz
+ DB2arrow: DB2arrow.c DB.c QV.c DB.h QV.h
+-	gcc $(CFLAGS) -o DB2arrow DB2arrow.c DB.c QV.c -lz
+ 
++arrow2DB: LDLIBS = -lz
+ arrow2DB: arrow2DB.c DB.c QV.c DB.h QV.h
+-	gcc $(CFLAGS) -o arrow2DB arrow2DB.c DB.c QV.c -lz
+ 
  DBsplit: DBsplit.c DB.c DB.h QV.c QV.h
 -	gcc $(CFLAGS) -o DBsplit DBsplit.c DB.c QV.c -lm
  
@@ -61,5 +69,5 @@ Last-Update: 2015-09-13
  DAM2fasta: DAM2fasta.c DB.c DB.h QV.c QV.h
 -	gcc $(CFLAGS) -o DAM2fasta DAM2fasta.c DB.c QV.c -lm
  
- clean:
- 	rm -f $(ALL)
+ DBwipe: DBwipe.c DB.c DB.h QV.c QV.h
+ 	gcc $(CFLAGS) -o DBwipe DBwipe.c DB.c QV.c -lm
diff --git a/debian/patches/destdir.patch b/debian/patches/destdir.patch
index 33f7e27..0a5fe3a 100644
--- a/debian/patches/destdir.patch
+++ b/debian/patches/destdir.patch
@@ -5,7 +5,7 @@ Forwarded: no
 Last-Update: 2015-09-13
 --- dazzdb.orig/Makefile
 +++ dazzdb/Makefile
-@@ -45,7 +45,8 @@
+@@ -55,7 +55,8 @@
  	rm -f dazz.db.tar.gz
  
  install:

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