[med-svn] [iqtree] branch master updated (3f5df9c -> 68ee35d)

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a change to branch master
in repository iqtree.

      from  3f5df9c   Add bug number
      adds  5bb8dce   Upload to unstable
       new  173db0c   New upstream version 1.5.3+dfsg
       new  6a1f154   Merge tag 'upstream/1.5.3+dfsg'
       new  ce88f8c   New upstream version
       new  0f11609   debhelper 10
       new  61ac236   d/watch: version=4
       new  68ee35d   Upload to unstable

The 6 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 CMakeLists.txt                  |   2 +-
 alignment.cpp                   |  52 ++++++++++++++++----
 debian/changelog                |  10 +++-
 debian/compat                   |   2 +-
 debian/control                  |   2 +-
 debian/patches/32bit_name.patch |  16 -------
 debian/patches/avoid_mavx.patch |  30 ------------
 debian/patches/series           |   3 --
 debian/patches/sse.patch        |  37 --------------
 debian/rules                    |   2 +-
 debian/watch                    |   2 +-
 iqtree.cpp                      |  16 ++++---
 model/modelfactory.cpp          | 104 ++++++++++++++++++++++++----------------
 model/modelfactory.h            |   5 +-
 model/modelset.cpp              |  10 ++++
 model/ratefree.cpp              |   2 +-
 phyloanalysis.cpp               |  10 ++--
 phylokernelnew.h                |  45 +++++++++--------
 phylotree.cpp                   |   4 +-
 phylotreesse.cpp                |  35 ++++++++++++--
 tools.cpp                       |   3 ++
 21 files changed, 210 insertions(+), 182 deletions(-)
 delete mode 100644 debian/patches/32bit_name.patch
 delete mode 100644 debian/patches/avoid_mavx.patch
 delete mode 100644 debian/patches/series
 delete mode 100644 debian/patches/sse.patch

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/iqtree.git