[med-svn] [sprai] 03/06: Imported Upstream version 0.9.9.22+dfsg

[Afif Elghraoui]

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afif pushed a commit to branch master
in repository sprai.

commit 1b14e8f2cfdd1989a7ee748e698759bb4a369f5f
Author: Afif Elghraoui <afif at debian.org>
Date:   Fri Jan 20 00:39:36 2017 -0800

    Imported Upstream version 0.9.9.22+dfsg
---
 doc/_build/html/_sources/Contact.txt  | 4 +++-
 doc/_build/html/_sources/Download.txt | 4 +++-
 doc/_build/html/_sources/index.txt    | 4 ++++
 makefile                              | 2 +-
 myrealigner.c                         | 1 -
 wscript                               | 2 +-
 6 files changed, 12 insertions(+), 5 deletions(-)

diff --git a/doc/_build/html/_sources/Contact.txt b/doc/_build/html/_sources/Contact.txt
index 7618f8d..8648430 100644
--- a/doc/_build/html/_sources/Contact.txt
+++ b/doc/_build/html/_sources/Contact.txt
@@ -1,7 +1,9 @@
 =============
 Contact
 =============
-imai at cb dot k dot u-tokyo dot ac dot jp
+sprai2017 at gmail dot com
+
+.. imai at cb dot k dot u-tokyo dot ac dot jp
 
 .. | ■バグ報告用テンプレート（仮）
 .. | ・sprai バージョン
diff --git a/doc/_build/html/_sources/Download.txt b/doc/_build/html/_sources/Download.txt
index e8973e4..c65687c 100644
--- a/doc/_build/html/_sources/Download.txt
+++ b/doc/_build/html/_sources/Download.txt
@@ -1,11 +1,13 @@
 ===========================
 Download The Latest Version
 ===========================
-http://zombie.cb.k.u-tokyo.ac.jp/sprai/dist/sprai-0.9.9.20.tar.gz
+http://zombie.cb.k.u-tokyo.ac.jp/sprai/dist/sprai-0.9.9.21.tar.gz
 
 ==============
 Older releases
 ==============
+http://zombie.cb.k.u-tokyo.ac.jp/sprai/dist/sprai-0.9.9.20.tar.gz
+
 http://zombie.cb.k.u-tokyo.ac.jp/sprai/dist/sprai-0.9.9.19.tar.gz
 
 http://zombie.cb.k.u-tokyo.ac.jp/sprai/dist/sprai-0.9.9.18.tar.gz
diff --git a/doc/_build/html/_sources/index.txt b/doc/_build/html/_sources/index.txt
index 720e258..f9f2235 100644
--- a/doc/_build/html/_sources/index.txt
+++ b/doc/_build/html/_sources/index.txt
@@ -20,6 +20,10 @@ Contents
 
 Changelogs
 =============
+2017.1.14 v0.9.9.22: Contact page was updated.
+
+2016.10.19 v0.9.9.21 check_circularity.pl: a bug was fixed. The bug is that check_circularity.pl shows circular regardless of linear when param_max_overlap_hang_len is big and start and end of a contig have a reverse overlap. (Thanks to Si for a report and code modification)
+
 2016.10.19 v0.9.9.20 ezez4makefile_v4.pl: an error message was modified. (Thanks to Yuuki Kobayashi for a report and Tomoaki Nishiyama for code modification)
 
 2016.8.5 v0.9.9.19: ezez_vx1.pl: use the blast_path parameter. (Thanks to Rajanikanth Govindarajulu for a report)
diff --git a/makefile b/makefile
index 8ff6771..78ff75f 100644
--- a/makefile
+++ b/makefile
@@ -1,5 +1,5 @@
 APPNAME = 'sprai'
-VERSION = '0.9.9.21'
+VERSION = '0.9.9.22'
 
 PREFIX=$(PWD)
 COMPILED= \
diff --git a/myrealigner.c b/myrealigner.c
index 5bd0e16..6125c43 100644
--- a/myrealigner.c
+++ b/myrealigner.c
@@ -4,7 +4,6 @@
 //
 // we modified Eric & Myers ReAligner, allowed by Myers on 10/22/2012
 // written by Takamasa Imai
-// E-mail: imai at cb.k.u-tokyo.ac.jp 
 
 double MIX = 0.5;
 int BandSize = 8;
diff --git a/wscript b/wscript
index 604a5f8..e0b432d 100644
--- a/wscript
+++ b/wscript
@@ -1,5 +1,5 @@
 APPNAME = 'sprai'
-VERSION = '0.9.9.21'
+VERSION = '0.9.9.22'
 
 srcdir = '.'
 blddir = 'build'

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