[med-svn] [hilive] 02/03: Adapt path to seqan cmake files

[Andreas Tille]

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tille pushed a commit to branch master
in repository hilive.

commit d08efd1ccb04486eca5024b709df667887dba5bc
Author: Andreas Tille <tille at debian.org>
Date:   Sat Jan 28 07:13:57 2017 +0100

    Adapt path to seqan cmake files
---
 debian/changelog                   | 7 +++++++
 debian/patches/use_FindSeQan.patch | 7 ++++---
 2 files changed, 11 insertions(+), 3 deletions(-)

diff --git a/debian/changelog b/debian/changelog
index fc63e2c..0a0fc6b 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,10 @@
+hilive (0.3-2) UNRELEASED; urgency=medium
+
+  * Adapt path to seqan cmake  files
+    Closes: #852850
+
+ -- Andreas Tille <tille at debian.org>  Sat, 28 Jan 2017 07:13:21 +0100
+
 hilive (0.3-1) unstable; urgency=medium
 
   [Andreas Tille]
diff --git a/debian/patches/use_FindSeQan.patch b/debian/patches/use_FindSeQan.patch
index d781c0f..32af7bf 100644
--- a/debian/patches/use_FindSeQan.patch
+++ b/debian/patches/use_FindSeQan.patch
@@ -3,7 +3,7 @@ Author: Gert Wollny <gw.fossdev at gmail.com>
 
 --- a/CMakeLists.txt
 +++ b/CMakeLists.txt
-@@ -12,7 +12,7 @@
+@@ -12,7 +12,7 @@ set (HiLive_VERSION_MINOR 3)
  set (HiLive_K 15 CACHE INT "Set the k-mer length for index and mapper")
  
  # Set flags for compilation
@@ -12,13 +12,14 @@ Author: Gert Wollny <gw.fossdev at gmail.com>
  
  
  # configure a header file to pass some of the CMake settings to the source code
-@@ -28,8 +28,8 @@
+@@ -28,8 +28,9 @@ include_directories("${PROJECT_BINARY_DI
  #############################
  ### setup seqan libraries ###
  
 -set (CMAKE_MODULE_PATH "/home/schulzeja/masterthesis/tools/seqan-src/util/cmake") # adjust this to [pathToSeqanCode]/util/cmake
 -set (SEQAN_INCLUDE_PATH "/home/schulzeja/masterthesis/tools/seqan-src/include/") # adjust this to [pathToSeqanCode]/include
-+set (CMAKE_MODULE_PATH "/usr/share/seqan/cmake") # adjust this to [pathToSeqanCode]/util/cmake
++set (SeqAn_DIR "/usr/share/cmake")
++set (CMAKE_MODULE_PATH "/usr/share/cmake") # adjust this to [pathToSeqanCode]/util/cmake
 +#set (SEQAN_INCLUDE_PATH "/home/schulzeja/masterthesis/tools/seqan-src/include/") # adjust this to [pathToSeqanCode]/include
  
  # Configure SeqAn, enabling features for libbz2 and zlib.

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