[med-svn] [gdcm] 02/04: Updated version 2.8.0 from 'upstream/2.8.0'
Gert Wollny
gewo at moszumanska.debian.org
Wed Jul 5 09:08:13 UTC 2017
This is an automated email from the git hooks/post-receive script.
gewo pushed a commit to branch master
in repository gdcm.
commit 0e65075ad2b4a8f74ce3085cb74f1778bfd167ae
Merge: 2322113 11474f8
Author: Gert Wollny <gewo at debian.org>
Date: Wed Jul 5 07:26:18 2017 +0000
Updated version 2.8.0 from 'upstream/2.8.0'
with Debian dir 191f2e6398b4659552bb70e8c973e4d77f378a78
.clang-format | 67 +
.travis.yml | 4 +-
Applications/Cxx/gdcmdump.cxx | 80 +
Applications/Cxx/gdcmscanner.cxx | 60 +-
Applications/Cxx/gdcmstream.cxx | 6 +-
Applications/Cxx/gdcmtar.cxx | 9 +-
CMake/ExportConfiguration/CMakeLists.txt | 2 +-
CMake/FindJavaProperties.cmake | 9 +-
CMake/FindOpenJPEG.cmake | 42 +-
CMake/UseCSharp.cmake | 48 +-
CMakeLists.txt | 22 +-
Examples/Cxx/CMakeLists.txt | 18 +-
Examples/Cxx/DeriveSeries.cxx | 87 +
Examples/Cxx/DumpGEMSMovieGroup.cxx | 6 +-
Examples/Cxx/DumpSiemensBase64.cxx | 88 +
Examples/Cxx/Extracting_All_Resolution.cxx | 2 +-
Source/Common/gdcmConfigure.h.in | 13 +-
Source/Common/gdcmDummyValueGenerator.cxx | 2 +-
Source/Common/gdcmMD5.cxx | 104 +-
Source/Common/gdcmMD5.h | 14 +-
.../gdcmOpenSSLCryptographicMessageSyntax.cxx | 24 +-
Source/Common/gdcmSwapper.txx | 2 +-
Source/Common/gdcmTesting.cxx | 2 +-
Source/Common/gdcmTesting.h | 2 +-
Source/DataDictionary/GroupName.dic | 72 -
Source/DataDictionary/NIH.dic | 15 -
Source/DataDictionary/Part6.xml | 8609 ++++++++-------
Source/DataDictionary/Part6.xsl | 358 +
Source/DataDictionary/Part6togdcm1.xsl | 39 -
Source/DataDictionary/SPI.dic | 140 -
Source/DataDictionary/gdcm1.xsl | 43 -
Source/DataDictionary/gdcm2html.xsl | 124 -
Source/DataDictionary/gdcm2pdf.xsl | 123 -
Source/DataDictionary/gdcmPrivateDefaultDicts.cxx | 1 +
Source/DataDictionary/txt2xml.py | 396 -
.../gdcmElement.h | 2 +-
.../gdcmMediaStorage.cxx | 4 +
.../gdcmMediaStorage.h | 2 +
.../gdcmReader.cxx | 184 +-
.../gdcmTransferSyntax.h | 2 -
.../DataStructureAndEncodingDefinition/gdcmVM.cxx | 4 +-
Source/DataStructureAndEncodingDefinition/gdcmVM.h | 2 +-
.../DataStructureAndEncodingDefinition/gdcmVR.cxx | 44 +-
Source/DataStructureAndEncodingDefinition/gdcmVR.h | 15 +-
Source/InformationObjectDefinition/Part3New.xsl | 219 +
Source/InformationObjectDefinition/Part4.xml | 319 +-
Source/InformationObjectDefinition/Part4.xsl | 257 +-
.../gdcmTableReader.cxx | 24 +
Source/MediaStorageAndFileFormat/CMakeLists.txt | 19 +-
.../MediaStorageAndFileFormat/gdcmAnonymizer.cxx | 4 +-
.../MediaStorageAndFileFormat/gdcmImageHelper.cxx | 42 +-
.../gdcmImageRegionReader.cxx | 36 +-
.../gdcmImageRegionReader.h | 1 +
.../gdcmJPEG2000Codec.cxx | 333 +-
.../MediaStorageAndFileFormat/gdcmPixmapWriter.cxx | 3 -
.../MediaStorageAndFileFormat/gdcmPixmapWriter.h | 1 -
Source/MediaStorageAndFileFormat/gdcmRLECodec.cxx | 12 +-
Source/MediaStorageAndFileFormat/gdcmSegment.cxx | 35 +-
Source/MediaStorageAndFileFormat/gdcmSegment.h | 18 +-
.../gdcmSegmentReader.cxx | 183 +-
.../gdcmSegmentWriter.cxx | 291 +-
Source/MediaStorageAndFileFormat/gdcmSorter.cxx | 15 +-
Source/MediaStorageAndFileFormat/gdcmSorter.h | 7 +
.../MediaStorageAndFileFormat/gdcmStringFilter.cxx | 11 -
.../MediaStorageAndFileFormat/gdcmStringFilter.h | 2 -
.../gdcmSurfaceReader.cxx | 82 +-
.../gdcmSurfaceWriter.cxx | 80 +-
Testing/Source/Data/CMakeLists.txt | 13 +-
.../Cxx/TestAttribute1.cxx | 4 +
.../Cxx/TestDS.cxx | 114 +-
.../Cxx/TestElement2.cxx | 14 +
.../Cxx/TestElement5.cxx | 2 +-
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.../Cxx/TestImageRegionReader1.cxx | 2 +-
.../Cxx/TestImageRegionReader2.cxx | 2 +-
.../MediaStorageAndFileFormat/Cxx/TestOverlay3.cxx | 4 +-
.../MediaStorageAndFileFormat/Cxx/TestPrinter1.cxx | 2 +-
Utilities/CMakeLists.txt | 20 +-
Utilities/Release/README.md | 2 +-
Utilities/Release/release.sh | 30 +-
Utilities/Tools/CMakeLists.txt | 3 -
Utilities/Tools/upsidedown.c | 46 -
Utilities/VTK/Applications/gdcm2vtk.cxx | 2 -
Utilities/VTK/Applications/gdcmviewer.cxx | 18 -
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Utilities/VTK/vtkGDCMImageReader2.cxx | 4 -
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Utilities/gdcmcharls/CMakeLists.txt | 18 +-
Utilities/gdcmcharls/License.txt | 30 +-
Utilities/gdcmcharls/README.GDCM.txt | 30 +-
Utilities/gdcmcharls/colortransform.h | 3 +
Utilities/gdcmcharls/config.h | 9 +-
Utilities/gdcmcharls/context.h | 44 +-
Utilities/gdcmcharls/contextrunmode.h | 16 +-
Utilities/gdcmcharls/decoderstrategy.h | 542 +-
Utilities/gdcmcharls/defaulttraits.h | 13 +-
Utilities/gdcmcharls/encoderstrategy.h | 111 +-
Utilities/gdcmcharls/header.cpp | 545 +-
Utilities/gdcmcharls/header.h | 84 +-
Utilities/gdcmcharls/interface.cpp | 270 +-
Utilities/gdcmcharls/interface.h | 50 +-
Utilities/gdcmcharls/jpegimagedatasegment.h | 28 +
Utilities/gdcmcharls/jpegls.cpp | 3 +-
Utilities/gdcmcharls/jpegmarker.h | 75 +
Utilities/gdcmcharls/jpegmarkersegment.cpp | 120 +
Utilities/gdcmcharls/jpegmarkersegment.h | 40 +
Utilities/gdcmcharls/jpegsegment.h | 22 +
Utilities/gdcmcharls/jpegstreamwriter.cpp | 107 +
Utilities/gdcmcharls/jpegstreamwriter.h | 114 +
Utilities/gdcmcharls/processline.h | 209 +-
Utilities/gdcmcharls/publictypes.h | 77 +-
Utilities/gdcmcharls/scan.h | 206 +-
Utilities/gdcmcharls/stdafx.cpp | 0
Utilities/gdcmcharls/streams.h | 156 -
Utilities/gdcmcharls/util.h | 11 +-
Utilities/gdcmjpeg/jdcoefct.c | 2 +-
Utilities/gdcmmd5/README | 2 -
Utilities/gdcmmd5/README.GDCM.txt | 12 +
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Utilities/gdcmopenjpeg-v1/libopenjpeg/j2k.h | 446 -
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Utilities/gdcmopenjpeg-v1/libopenjpeg/jp2.c | 1089 --
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.../gdcmopenjpeg-v1/libopenjpeg/opj_includes.h | 136 -
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Utilities/gdcmopenjpeg-v1/libopenjpeg/t1.c | 1581 ---
Utilities/gdcmopenjpeg-v1/libopenjpeg/t2.c | 795 --
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Utilities/gdcmopenjpeg-v1/libopenjpeg/tcd.h | 286 -
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Utilities/gdcmopenjpeg-v1/ltmain.sh | 8750 ---------------
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Utilities/gdcmopenjpeg-v1/opj_config.h.in.user | 41 -
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.../gdcmopenjpeg-v2/CMake/CTestCustom.cmake.in | 21 -
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.../gdcmopenjpeg-v2/CMake/OpenJPEGConfig.cmake.in | 48 -
.../gdcmopenjpeg-v2/CMake/mymachine_openjpeg.cmake | 50 -
Utilities/gdcmopenjpeg-v2/CMakeLists.txt | 195 -
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Utilities/gdcmopenjpeg-v2/README.v2 | 25 -
Utilities/gdcmopenjpeg-v2/codec/CMakeLists.txt | 94 -
Utilities/gdcmopenjpeg-v2/codec/Makefile | 14 -
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Utilities/gdcmopenjpeg-v2/codec/convert.c | 2519 -----
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Utilities/gdcmopenjpeg-v2/codec/dirent.h | 677 --
Utilities/gdcmopenjpeg-v2/codec/image_to_j2k.c | 1797 ---
Utilities/gdcmopenjpeg-v2/codec/index.c | 391 -
Utilities/gdcmopenjpeg-v2/codec/j2k_dump.c | 495 -
Utilities/gdcmopenjpeg-v2/codec/j2k_to_image.c | 769 --
Utilities/gdcmopenjpeg-v2/doc/CMakeLists.txt | 12 -
Utilities/gdcmopenjpeg-v2/doc/Doxyfile.dox | 234 -
Utilities/gdcmopenjpeg-v2/jpwl/CMakeLists.txt | 54 -
Utilities/gdcmopenjpeg-v2/jpwl/README.txt | 136 -
Utilities/gdcmopenjpeg-v2/jpwl/crc.c | 160 -
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Utilities/gdcmopenjpeg-v2/jpwl/rs.c | 594 -
Utilities/gdcmopenjpeg-v2/jpwl/rs.h | 111 -
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Utilities/gdcmopenjpeg-v2/libopenjpeg/bio.c | 189 -
Utilities/gdcmopenjpeg-v2/libopenjpeg/bio.h | 125 -
Utilities/gdcmopenjpeg-v2/libopenjpeg/cio.c | 825 --
Utilities/gdcmopenjpeg-v2/libopenjpeg/cio.h | 358 -
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.../gdcmopenjpeg-v2/libopenjpeg/function_list.c | 149 -
Utilities/gdcmopenjpeg-v2/libopenjpeg/image.c | 174 -
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Utilities/gdcmopenjpeg-v2/libopenjpeg/invert.c | 290 -
Utilities/gdcmopenjpeg-v2/libopenjpeg/j2k.c | 9411 ----------------
Utilities/gdcmopenjpeg-v2/libopenjpeg/j2k.h | 737 --
Utilities/gdcmopenjpeg-v2/libopenjpeg/j2k_lib.c | 64 -
Utilities/gdcmopenjpeg-v2/libopenjpeg/jp2.c | 2229 ----
Utilities/gdcmopenjpeg-v2/libopenjpeg/jp2.h | 341 -
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Utilities/gdcmopenjpeg-v2/libopenjpeg/mct.c | 303 -
Utilities/gdcmopenjpeg-v2/libopenjpeg/mct.h | 130 -
Utilities/gdcmopenjpeg-v2/libopenjpeg/mqc.c | 542 -
Utilities/gdcmopenjpeg-v2/libopenjpeg/mqc.h | 198 -
Utilities/gdcmopenjpeg-v2/libopenjpeg/openjpeg.c | 947 --
Utilities/gdcmopenjpeg-v2/libopenjpeg/openjpeg.h | 1072 --
.../gdcmopenjpeg-v2/libopenjpeg/opj_configure.h | 16 -
.../gdcmopenjpeg-v2/libopenjpeg/opj_includes.h | 124 -
Utilities/gdcmopenjpeg-v2/libopenjpeg/opj_malloc.h | 144 -
Utilities/gdcmopenjpeg-v2/libopenjpeg/pi.c | 2000 ----
Utilities/gdcmopenjpeg-v2/libopenjpeg/profile.c | 177 -
Utilities/gdcmopenjpeg-v2/libopenjpeg/profile.h | 83 -
Utilities/gdcmopenjpeg-v2/libopenjpeg/raw.c | 88 -
Utilities/gdcmopenjpeg-v2/libopenjpeg/raw.h | 101 -
Utilities/gdcmopenjpeg-v2/libopenjpeg/t1.c | 1284 ---
Utilities/gdcmopenjpeg-v2/libopenjpeg/t1.h | 156 -
Utilities/gdcmopenjpeg-v2/libopenjpeg/t1_luts.h | 142 -
Utilities/gdcmopenjpeg-v2/libopenjpeg/t2.c | 1287 ---
Utilities/gdcmopenjpeg-v2/libopenjpeg/t2.h | 120 -
Utilities/gdcmopenjpeg-v2/libopenjpeg/tcd.c | 2121 ----
Utilities/gdcmopenjpeg-v2/libopenjpeg/tcd.h | 344 -
Utilities/gdcmopenjpeg-v2/libopenjpeg/tgt.c | 344 -
Utilities/gdcmopenjpeg-v2/mj2/CMakeLists.txt | 42 -
Utilities/gdcmopenjpeg-v2/mj2/Makefile | 20 -
.../gdcmopenjpeg-v2/mj2/extract_j2k_from_mj2.c | 148 -
Utilities/gdcmopenjpeg-v2/mj2/frames_to_mj2.c | 806 --
Utilities/gdcmopenjpeg-v2/mj2/meta_out.c | 2181 ----
Utilities/gdcmopenjpeg-v2/mj2/meta_out.h | 12 -
Utilities/gdcmopenjpeg-v2/mj2/mj2.c | 2906 -----
Utilities/gdcmopenjpeg-v2/mj2/mj2.h | 391 -
Utilities/gdcmopenjpeg-v2/mj2/mj2_convert.c | 329 -
Utilities/gdcmopenjpeg-v2/mj2/mj2_convert.h | 45 -
Utilities/gdcmopenjpeg-v2/mj2/mj2_to_frames.c | 225 -
Utilities/gdcmopenjpeg-v2/mj2/mj2_to_metadata.c | 312 -
Utilities/gdcmopenjpeg-v2/mj2/mj2_to_metadata.dtd | 425 -
Utilities/gdcmopenjpeg-v2/mj2/mj2_to_metadata.h | 9 -
.../gdcmopenjpeg-v2/mj2/mj2_to_metadata_Notes.doc | Bin 35328 -> 0 bytes
Utilities/gdcmopenjpeg-v2/mj2/readme.txt | 3 -
Utilities/gdcmopenjpeg-v2/mj2/wrap_j2k_in_mj2.c | 368 -
Utilities/gdcmopenjpeg-v2/openjpeg_mangle.h.in | 278 -
Utilities/gdcmopenjpeg-v2/opj_configure.h.in | 16 -
.../CMakeLists.txt | 27 -
.../test2_decoder.c | 367 -
.../test2_encoder.c | 486 -
.../test_V2_tile_handling/CMakeLists.txt | 24 -
.../test_V2_tile_handling/test_decoder.c | 247 -
.../test_V2_tile_handling/test_encoder.c | 301 -
Utilities/gdcmopenjpeg/CMakeLists.txt | 385 +
.../license.txt => gdcmopenjpeg/LICENSE} | 19 +-
Utilities/gdcmopenjpeg/README.GDCM.txt | 23 +
Utilities/gdcmopenjpeg/cmake/CTestCustom.cmake.in | 40 +
.../gdcmopenjpeg/cmake/EnsureFileInclude.cmake | 26 +
Utilities/gdcmopenjpeg/cmake/FindCPPCHECK.cmake | 16 +
Utilities/gdcmopenjpeg/cmake/FindFCGI.cmake | 20 +
Utilities/gdcmopenjpeg/cmake/FindJPYLYZER.cmake | 12 +
Utilities/gdcmopenjpeg/cmake/FindKAKADU.cmake | 24 +
Utilities/gdcmopenjpeg/cmake/FindLCMS.cmake | 31 +
Utilities/gdcmopenjpeg/cmake/FindLCMS2.cmake | 31 +
Utilities/gdcmopenjpeg/cmake/JPIPTestDriver.cmake | 9 +
Utilities/gdcmopenjpeg/cmake/OpenJPEGCPack.cmake | 72 +
.../cmake}/OpenJPEGConfig.cmake.in | 14 +-
Utilities/gdcmopenjpeg/cmake/TestFileOffsetBits.c | 11 +
.../gdcmopenjpeg/cmake/TestLargeFiles.c.cmake.in | 23 +
Utilities/gdcmopenjpeg/cmake/TestLargeFiles.cmake | 134 +
Utilities/gdcmopenjpeg/cmake/TestWindowsFSeek.c | 11 +
.../gdcmopenjpeg/cmake/openjpeg_valgrind.supp | 39 +
Utilities/gdcmopenjpeg/src/lib/CMakeLists.txt | 17 +
.../gdcmopenjpeg/src/lib/openjp2/CMakeLists.txt | 153 +
.../src/lib/openjp2}/bio.c | 116 +-
.../src/lib/openjp2}/bio.h | 47 +-
.../gdcmopenjpeg/src/lib/openjp2/cidx_manager.c | 241 +
.../src/lib/openjp2/cidx_manager.h} | 50 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/cio.c | 644 ++
Utilities/gdcmopenjpeg/src/lib/openjp2/cio.h | 394 +
Utilities/gdcmopenjpeg/src/lib/openjp2/dwt.c | 934 ++
.../src/lib/openjp2}/dwt.h | 37 +-
.../src/lib/openjp2}/event.c | 83 +-
.../src/lib/openjp2}/event.h | 78 +-
.../gdcmopenjpeg/src/lib/openjp2/function_list.c | 117 +
.../src/lib/openjp2}/function_list.h | 69 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/image.c | 242 +
.../src/lib/openjp2}/image.h | 33 +-
.../src/lib/openjp2/indexbox_manager.h | 148 +
Utilities/gdcmopenjpeg/src/lib/openjp2/invert.c | 294 +
.../src/lib/openjp2}/invert.h | 37 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/j2k.c | 10981 +++++++++++++++++++
Utilities/gdcmopenjpeg/src/lib/openjp2/j2k.h | 863 ++
Utilities/gdcmopenjpeg/src/lib/openjp2/jp2.c | 3168 ++++++
Utilities/gdcmopenjpeg/src/lib/openjp2/jp2.h | 483 +
.../src/lib/openjp2/libopenjp2.pc.cmake.in | 14 +
Utilities/gdcmopenjpeg/src/lib/openjp2/mct.c | 557 +
.../src/lib/openjp2}/mct.h | 75 +-
.../src/lib/openjp2}/mqc.c | 253 +-
.../src/lib/openjp2}/mqc.h | 67 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/openjpeg.c | 960 ++
Utilities/gdcmopenjpeg/src/lib/openjp2/openjpeg.h | 1564 +++
.../src/lib/openjp2/openjpeg_mangle.h.in | 61 +
.../src/lib/openjp2/opj_clock.c} | 20 +-
.../src/lib/openjp2/opj_clock.h} | 22 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/opj_codec.h | 165 +
.../src/lib/openjp2/opj_config.h.cmake.in | 10 +
.../src/lib/openjp2/opj_config_private.h.cmake.in | 49 +
.../gdcmopenjpeg/src/lib/openjp2/opj_includes.h | 218 +
.../gdcmopenjpeg/src/lib/openjp2/opj_intmath.h | 223 +
.../src/lib/openjp2/opj_inttypes.h} | 40 +-
.../gdcmopenjpeg/src/lib/openjp2/opj_malloc.c | 239 +
.../src/lib/openjp2/opj_malloc.h} | 173 +-
.../src/lib/openjp2/opj_stdint.h} | 101 +-
.../gdcmopenjpeg/src/lib/openjp2/phix_manager.c | 193 +
Utilities/gdcmopenjpeg/src/lib/openjp2/pi.c | 1878 ++++
.../src/lib/openjp2}/pi.h | 99 +-
.../gdcmopenjpeg/src/lib/openjp2/ppix_manager.c | 196 +
.../src/lib/openjp2}/raw.c | 30 +-
.../src/lib/openjp2}/raw.h | 36 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/t1.c | 1767 +++
.../src/lib/openjp2}/t1.h | 74 +-
.../src/lib/openjp2}/t1_generate_luts.c | 67 +-
.../src/lib/openjp2}/t1_luts.h | 14 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/t2.c | 1386 +++
.../src/lib/openjp2}/t2.h | 87 +-
Utilities/gdcmopenjpeg/src/lib/openjp2/tcd.c | 2194 ++++
Utilities/gdcmopenjpeg/src/lib/openjp2/tcd.h | 369 +
Utilities/gdcmopenjpeg/src/lib/openjp2/tgt.c | 335 +
.../src/lib/openjp2}/tgt.h | 73 +-
.../gdcmopenjpeg/src/lib/openjp2/thix_manager.c | 136 +
.../gdcmopenjpeg/src/lib/openjp2/tpix_manager.c | 185 +
Utilities/gdcmutfcpp/README.GDCM.txt | 12 +-
Utilities/gdcmutfcpp/utf8.h | 68 +-
Utilities/gdcmutfcpp/utf8/checked.h | 132 +-
Utilities/gdcmutfcpp/utf8/core.h | 215 +-
Utilities/gdcmutfcpp/utf8/unchecked.h | 48 +-
Utilities/gdcmzlib/README.GDCM.txt | 14 +
Utilities/gdcmzlib/gzio.c | 4 +-
Utilities/rle/CMakeLists.txt | 16 -
Utilities/rle/example.c | 92 -
Utilities/rle/rle.c | 35 -
Utilities/rle/rledump.c | 53 -
Utilities/rle/rlelib.c | 162 -
Utilities/rle/rlelib.h | 67 -
Utilities/wxWidgets/CMakeLists.txt | 67 -
Utilities/wxWidgets/Copyright.txt | 17 -
Utilities/wxWidgets/MyDialog.cpp | 30 -
Utilities/wxWidgets/MyDialog.h | 32 -
Utilities/wxWidgets/main.cpp | 23 -
Utilities/wxWidgets/wxGDCMFrame.cpp | 112 -
Utilities/wxWidgets/wxGDCMFrame.h | 31 -
Utilities/wxWidgets/wxGDCMFrameBase.cpp | 79 -
Utilities/wxWidgets/wxGDCMFrameBase.h | 45 -
.../wxWidgets/wxVTKRenderWindowInteractor.cxx | 815 --
Utilities/wxWidgets/wxVTKRenderWindowInteractor.h | 181 -
Utilities/wxWidgets/wxgdcm.wxg | 180 -
Wrapping/Python/docstrings.i | 18 +-
Wrapping/Python/gdcmswig.i | 1 +
appveyor.yml | 2 +-
641 files changed, 42095 insertions(+), 151084 deletions(-)
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