[med-svn] [htslib] annotated tag debian/1.4.1-3 created (now d5b4df5)
Sascha Steinbiss
satta at debian.org
Mon Jul 17 16:55:20 UTC 2017
This is an automated email from the git hooks/post-receive script.
satta pushed a change to annotated tag debian/1.4.1-3
in repository htslib.
at d5b4df5 (tag)
tagging 485cda1a9936c7edcc890c6b6dc3a76a90cd1f7b (commit)
replaces 1.4.1
tagged by Sascha Steinbiss
on Mon Jul 17 18:55:15 2017 +0200
- Log -----------------------------------------------------------------
htslib Debian release 1.4.1-3
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Andreas Tille (36):
Add README.source to explain the workflow of this Git repository
In this repository the 'v' in front of the version number needs to be left out ...
Define PATH_MAX
More verbose description vor -dev and -test package
Fix lintian override
Verified Mayhem bug report which is solved in this version
Upload to unstable
hardening=+bindnow, upload to unstable
Fix build on hurd
Add myself to uploaders, upload to unstable
Merge tag '1.3.2' into debian/unstable
New upstream version
Add remark about pristine-tar commit
Upload to unstable
Add build-essential to autopkgtest
debhelper 10
d/watch: version=4
Add @builddeps@ to autopkgtest
Install header files from cram dir in -dev package since these are used in libseqlib
Fix pkg-config
Upload to experimental
Merge tag '1.4' into debian/unstable
New upstream version
Update patches
Drop autoconf from Build-Depends, add libbz2-dev and liblzma-dev to Build-Depends
Remove binary files from test results
Remove symbols file since I'm too lazy to maintain these - volunteers welcome for a final upload to instable
hange library name to match soname
Include htsfile binary into tabix package since its used by manta package
Upload to experimental
add the cram_to_bam function to the public interface of htslib because it is used by code in Sambamba
Merge tag '1.4.1' into debian/unstable
New upstream version
Upload to unstable
Create symlinks only for arch=indep target when target dir exists
Upload to unstable
Charles Plessy (97):
Listed copyright and license notices.
Draft package.
Merge branch 'develop' into debian/unstable
Documented cram/*, collated copyright notices for works under the MIT license.
Do not build a htslib binary package: there is not htscmd program anymore.
Install in and from debian/tmp.
Merge branch 'develop' into debian/unstable
Corrected paths.
Make the package multi-architecture.
Align package name on soname.
Align package name on soname.
Clean test directory before packaging it.
Submitted ITP #729282 with the current package descriptions.
Merge branch 'debian/unstable' of github.com:Debian/htslib into debian/unstable
Uses pristine-tar and may use git-buildpackage.
Upstream tag 0.2.0_rc3.
Watch GitHub.
Mangle the upstream name, so that the tarball has a correct version number.
Empty symbols file, to be populated by Debhelper.
fakeroot dh_makeshlibs | patch -p0
Removed minor number.
Corrected length of lines.
Make dh-exec files executables, since we are using the 1.0 source format.
Pass dpkg build flags.
Make libhts-dev depend on libhts0.
Prospective VCS URLs (Alioth is currently down…).
htslib (0.2.0~rc3-1) unstable; urgency=low
Override PACKAGE_VERSION to avoid tags with a slash in the name.
Finally use the 3.0 (quilt) format in single-debian-patch mode.
Merge branch 'develop' into debian/unstable
Changelog for work in progress.
Updated symbols file.
Merge remote-tracking branch 'upstream/develop' into debian/unstable
Refreshed changelog after pulling new upstream tag.
New upstream tag; no new copyright nor license statement.
Adjusted substitution variables following dpkg's warnings.
Use the Debian as package version.
Updated the changelog.
Removed debug command accidentally introduced.
Merge branch 'develop' into debian/unstable
Merge branch 'develop' into debian/unstable
New upstream tag; updated changelog.
Updated Symbols file.
Merge branch 'develop' into debian/unstable
Updated symbols again.
Merge branch 'master' into debian/unstable
New upstream release; no new license notice.
Build on the master branch.
Updated symbols file.
New major version (libhts0 -> libhts1).
Remove Debian revision from symbols version.
Pass multiarch path to Make. Install pkgconfig file.
Replace the old tabix package (from the tabix source package).
Dynamically link tabix and bgzip.
Prepare changelog.
Polish descriptions.
Statically link tabix and bgzip for the moment.
htslib (1.0-1) experimental; urgency=low
htslib (1.0-2) unstable; urgency=medium
Merge tag '1.1' into debian/unstable
New upstream release, no new copyright nor license notice.
Updated symbols file.
Removed orphan paragraph.
Allow parallel build.
Normalise source package control file (VCS-Browser, Pre-Depends).
Conforms to Policy 3.9.6.
htslib (1.1-1) unstable; urgency=medium
Merge branch 'develop' into debian/unstable
Current changelog; not sure to upload or not.
Merge tag '1.2.1' into debian/unstable
Update symbols file. Note that there are missing symbols.
New upstream release; no new copyright nor license statement.
Install NEWS as upstream changelog.
Override a Lintian false positive.
Clead test directory.
Corrected a typo.
htslib (1.2.1-1) unstable; urgency=medium
Merge tag '1.3' into debian/unstable
New upstream release; corrected path to a copyright statement.
Upstream does not prefix tags with 'v'.
Merge tag '1.3.1' into debian/unstable
First go back on debian/unstable, otherwise debian/watch is not there.
A To Do list.
Remove add_largefile.patch, applied upstream.
Update symbols file. Missing _vcf_parse_format at Base and fai_read at Base.
Updated changelog.
Enable libcurl.
Enabled libcurl, Do not enable plugins (no plugins available...).
Build-depend on libcurl4-gnutls-dev and libssl-dev.
New upstream release; no new copyright nor license notice.
Conforms to the Policy version 3.9.8.
htslib (1.3.1-1) unstable; urgency=medium
htslib (1.3.1-1) unstable; urgency=medium
Breaks: samtools (<< 1.3.1)
Current changelog.
Revert "Breaks: samtools (<< 1.3.1)"
Step back to 1.3.1-1, ready for backport.
Sascha Steinbiss (13):
use secure Vcs-Git
update symbols file
ignore metadata different between tarball and git repo
update d/changelog
set release distribution to unstable
add upstream's patch for largefile issue
add patch to run configure
run configure step before build
update changelog
Merge branch 'debian/unstable' of ssh://git.debian.org/git/debian-med/htslib into debian/unstable
dch -r
move around team upload notice
fix FTBFS
Steffen Moeller (5):
Introduced EDAM annotation for TABIX
Newly introduced Tabix index file format
Tabix index file format, longer form
Added reference to tabix
Merge branch 'debian/unstable' of ssh://anonscm.debian.org/git/debian-med/htslib into debian/unstable
cbk-guest (1):
Autopkgtest added
-----------------------------------------------------------------------
No new revisions were added by this update.
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