[med-svn] [python-pybedtools] branch master updated (0948def -> 22da642)
Andreas Tille
tille at debian.org
Wed Jul 19 19:35:40 UTC 2017
This is an automated email from the git hooks/post-receive script.
tille pushed a change to branch master
in repository python-pybedtools.
from 0948def Upload to unstable
new bb15845 New upstream version 0.7.10
new 799584b Updated version 0.7.10 from 'upstream/0.7.10'
new bbbb9e5 New upstream version
new a300499 Build-Depends: python3-all-dev
new 5bd42ef Adapt patches
new 2c0850c Standards-Version: 4.0.0 (no changes needed)
new 9c55d29 do not uselessly parse d/changelog
new 22da642 Hardening
The 8 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
.travis.yml | 7 +-
condatest.sh | 66 ++++++-----
debian/changelog | 13 +++
debian/control | 5 +-
debian/patches/disable-test-156 | 68 +++---------
debian/patches/disable-write-version | 16 +--
debian/patches/enable-package-data | 6 +-
debian/patches/rename-scripts | 6 +-
debian/rules | 5 +-
docs/source/_static/custom.css | 3 +
.../autodocs/pybedtools.contrib.plotting.Track.rst | 10 +-
docs/source/changes.rst | 28 +++++
docs/source/conf.py | 2 +-
docs/source/topical-saving.rst | 43 +++++---
optional-requirements.txt | 6 +
pybedtools/bedtool.py | 108 ++++++++++++++++--
pybedtools/contrib/bigwig.py | 52 ++++++++-
pybedtools/contrib/long_range_interaction.py | 6 +-
pybedtools/settings.py | 1 +
pybedtools/test/data/gdc.othersort.bam | Bin 0 -> 275 bytes
pybedtools/test/mpl-expected.png | Bin 31626 -> 24450 bytes
pybedtools/test/test1.py | 121 +++++++++++++++------
pybedtools/version.py | 10 +-
requirements.txt | 6 +-
setup.py | 37 ++++---
requirements.txt => test-requirements.txt | 3 +-
26 files changed, 433 insertions(+), 195 deletions(-)
create mode 100644 docs/source/_static/custom.css
create mode 100644 optional-requirements.txt
create mode 100644 pybedtools/test/data/gdc.othersort.bam
copy requirements.txt => test-requirements.txt (57%)
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