[med-svn] [python-pybedtools] branch upstream updated (a880e33 -> bb15845)
Andreas Tille
tille at debian.org
Wed Jul 19 19:35:41 UTC 2017
This is an automated email from the git hooks/post-receive script.
tille pushed a change to branch upstream
in repository python-pybedtools.
from a880e33 New upstream version 0.7.8
new bb15845 New upstream version 0.7.10
The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
.travis.yml | 7 +-
condatest.sh | 66 ++++++-----
docs/source/_static/custom.css | 3 +
.../autodocs/pybedtools.contrib.plotting.Track.rst | 10 +-
docs/source/changes.rst | 28 +++++
docs/source/conf.py | 2 +-
docs/source/topical-saving.rst | 43 +++++---
optional-requirements.txt | 6 +
pybedtools/bedtool.py | 108 ++++++++++++++++--
pybedtools/contrib/bigwig.py | 52 ++++++++-
pybedtools/contrib/long_range_interaction.py | 6 +-
pybedtools/settings.py | 1 +
pybedtools/test/data/gdc.othersort.bam | Bin 0 -> 275 bytes
pybedtools/test/mpl-expected.png | Bin 31626 -> 24450 bytes
pybedtools/test/test1.py | 121 +++++++++++++++------
pybedtools/version.py | 10 +-
requirements.txt | 6 +-
setup.py | 37 ++++---
requirements.txt => test-requirements.txt | 3 +-
19 files changed, 387 insertions(+), 122 deletions(-)
create mode 100644 docs/source/_static/custom.css
create mode 100644 optional-requirements.txt
create mode 100644 pybedtools/test/data/gdc.othersort.bam
copy requirements.txt => test-requirements.txt (57%)
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