[med-svn] [ngs-sdk] 01/02: Merge branch 'master' into debian/jessie-backports

[Andreas Tille]

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tille pushed a commit to branch debian/jessie-backports
in repository ngs-sdk.

commit 60476e16d13c3b7eac95d56e87c62ee96f3a4e2e
Merge: b160682 2a2135a
Author: Andreas Tille <tille at debian.org>
Date:   Wed Jun 7 13:59:41 2017 +0200

    Merge branch 'master' into debian/jessie-backports

 CHANGES.md                                         |    55 +-
 README.md                                          |    13 +
 debian/changelog                                   |    21 +
 ..._exclude_certain_architectures_explicitly.patch |     8 +-
 debian/rules                                       |    24 +-
 ngs-bam/.gitignore                                 |     1 +
 ngs-bam/Makefile                                   |     2 +-
 ngs-bam/Makefile.install                           |   121 +
 CHANGES => ngs-bam/Makefile.vers                   |    20 +-
 ngs-bam/setup/konfigure.perl                       |   206 +-
 ngs-bam/setup/package.prl                          |     1 -
 ngs-java/Makefile.java                             |    19 +-
 ngs-bam/Makefile => ngs-java/Makefile.vers         |    23 +-
 ngs-java/examples/Makefile                         |     8 +-
 ngs-java/gov/nih/nlm/ncbi/ngs/DownloadManager.java |     2 +-
 ngs-java/gov/nih/nlm/ncbi/ngs/HttpManager.java     |     4 +-
 ngs-java/gov/nih/nlm/ncbi/ngs/LibDependencies.java |     4 +-
 ngs-java/gov/nih/nlm/ncbi/ngs/LibManager.java      |    10 +-
 ngs-java/gov/nih/nlm/ncbi/ngs/NGS.java             |    10 +-
 ngs-java/setup/konfigure.perl                      |   204 +-
 ngs-java/setup/package.prl                         |     1 -
 ngs-python/.gitignore                              |     1 +
 ngs-bam/Makefile => ngs-python/Makefile.vers       |    23 +-
 ngs-python/ngs/LibManager.py                       |     2 +-
 ngs-python/setup/konfigure.perl                    |   204 +-
 ngs-python/setup/package.prl                       |     1 -
 ngs-sdk/.gitignore                                 |     1 +
 ngs-sdk/Makefile                                   |     2 +-
 ngs-bam/Makefile => ngs-sdk/Makefile.vers          |    23 +-
 ngs-sdk/dispatch/version.h                         |     2 +-
 ngs-sdk/examples/expected.txt                      | 19382 +++++++++----------
 ngs-sdk/language/java/jni_StatisticsItf.cpp        |     6 +-
 ngs-sdk/language/java/jni_String.cpp               |    14 +-
 ngs-sdk/setup/konfigure.perl                       |   203 +-
 ngs-sdk/setup/package.prl                          |     1 -
 35 files changed, 10464 insertions(+), 10158 deletions(-)

diff --cc debian/changelog
index 0b61671,88c305b..00c44e7
--- a/debian/changelog
+++ b/debian/changelog
@@@ -1,9 -1,24 +1,30 @@@
+ ngs-sdk (1.3.0-2) unstable; urgency=medium
+ 
+   * Fix install dir by using DEB_HOST_MULTIARCH instead of DEB_BUILD_GNU_TYPE
+     (thanks for the patch to Graham Inggs <ginggs at debian.org>)
+     Closes: #859257
+ 
+  -- Andreas Tille <tille at debian.org>  Sat, 01 Apr 2017 22:33:07 +0200
+ 
+ ngs-sdk (1.3.0-1) unstable; urgency=medium
+ 
+   * New upstream release
+   * hardening=+bindnow
+ 
+  -- Andreas Tille <tille at debian.org>  Wed, 09 Nov 2016 08:54:53 +0100
+ 
+ ngs-sdk (1.2.5-1) unstable; urgency=medium
+ 
+   * New upstream release 
+ 
+  -- Olivier Sallou <osallou at debian.org>  Thu, 18 Aug 2016 10:51:22 +0200
+ 
 +ngs-sdk (1.2.4-2~bpo8+1) jessie-backports; urgency=medium
 +
 +  * Rebuild for jessie-backports.
 +
 + -- Andreas Tille <tille at debian.org>  Tue, 12 Jul 2016 15:21:16 +0200
 +
  ngs-sdk (1.2.4-2) unstable; urgency=medium
  
    * Add a maven2 pom file for libjava-ngs

-- 
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