[med-svn] [cd-hit] 02/02: Preparing for new upstream version

Steffen Möller moeller at moszumanska.debian.org
Wed Jun 14 14:10:06 UTC 2017


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moeller pushed a commit to branch master
in repository cd-hit.

commit fd43854d490dfcee73310e099c9b7dbdacd6e656
Author: Steffen Moeller <moeller at debian.org>
Date:   Wed Jun 14 16:03:40 2017 +0200

    Preparing for new upstream version
---
 debian/changelog     | 14 ++++++++++++++
 debian/upstream/edam | 16 ++++++++++++++++
 2 files changed, 30 insertions(+)

diff --git a/debian/changelog b/debian/changelog
index 6afe0a9..87f8e99 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,17 @@
+cd-hit (4.6.7-1) unstable; urgency=medium
+
+  * New upstream version
+    - cd-hit-est and cd-hit-est-2d now can cluster paired end (PE) reads.
+    - user can select sub-sequence from the beginning of the sequences for clustering.
+    - psi-cd-hit.pl can work with blast+.
+    - output cluster file can be sorted by cluster size, in addition to cluster length, which is still the default
+    - output fasta file can be sorted by cluster size.
+  * upstream/metadata: Added RRID
+  * upstream/edam: Crude first entry
+  * Team upload.
+
+ -- Steffen Moeller <moeller at debian.org>  Wed, 14 Jun 2017 15:55:31 +0200
+
 cd-hit (4.6.6-2) unstable; urgency=medium
 
   [ Canberk Koç ]
diff --git a/debian/upstream/edam b/debian/upstream/edam
new file mode 100644
index 0000000..44f13fb
--- /dev/null
+++ b/debian/upstream/edam
@@ -0,0 +1,16 @@
+---
+---
+ontology: EDAM (1.13)
+topic:
+  - Genomics
+scopes:
+  - name: summary
+    function:
+      - Sequence clustering
+      - Sequence alignment
+    input:
+      - data: Nucleic acid sequence (raw)
+        format: [FASTA, FASTQ]
+    output:
+      - data: Sequence alignment (nucleic acid)
+        format: [FASTA]

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