[med-svn] [adapterremoval] 05/05: Add missing header, upload to unstable

[Andreas Tille]

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tille pushed a commit to branch master
in repository adapterremoval.

commit 3383df242dbcd7921e5e411438fb9ae46420171c
Author: Andreas Tille <tille at debian.org>
Date:   Thu Jun 22 09:13:20 2017 +0200

    Add missing header, upload to unstable
---
 debian/changelog                        |  4 ++--
 debian/patches/add_missing_header.patch | 18 ++++++++++++++++++
 debian/patches/series                   |  1 +
 3 files changed, 21 insertions(+), 2 deletions(-)

diff --git a/debian/changelog b/debian/changelog
index dc73dc0..0dbd06f 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,11 +1,11 @@
-adapterremoval (2.2.1-1) UNRELEASED; urgency=medium
+adapterremoval (2.2.1-1) unstable; urgency=medium
 
   * New upstream version
   * Drop spelling patch
   * debhelper 10
   * verified watch file and set version=4
 
- -- Andreas Tille <tille at debian.org>  Thu, 22 Jun 2017 08:52:57 +0200
+ -- Andreas Tille <tille at debian.org>  Thu, 22 Jun 2017 09:08:33 +0200
 
 adapterremoval (2.2.0-1) unstable; urgency=medium
 
diff --git a/debian/patches/add_missing_header.patch b/debian/patches/add_missing_header.patch
new file mode 100644
index 0000000..34c8005
--- /dev/null
+++ b/debian/patches/add_missing_header.patch
@@ -0,0 +1,18 @@
+Author: Andreas Tille <tille at debian.org>
+Last-Update: Thu, 22 Jun 2017 08:57:11 +0200
+Description: Deal with
+  src/fastq.cc: In member function 'ar::fastq::ntrimmed ar::fastq::trim_windowed_bases(bool, char, double)':
+  src/fastq.cc:198:24: error: 'accumulate' is not a member of 'std'
+       long running_sum = std::accumulate(m_qualities.begin(),
+                          ^~~
+
+--- a/src/fastq.cc
++++ b/src/fastq.cc
+@@ -24,6 +24,7 @@
+ \*************************************************************************/
+ #include <algorithm>
+ #include <cmath>
++#include <numeric>
+ #include <stdexcept>
+ #include <sstream>
+ 
diff --git a/debian/patches/series b/debian/patches/series
index 3af111a..c52bbfb 100644
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -1,3 +1,4 @@
 adapt-benchmarking.patch
 reduce_benchmark_length.patch
 delete_adapterremoval1x_completely.patch
+add_missing_header.patch

-- 
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