[med-svn] [circlator] 04/04: support Canu as alternative assembler

Sascha Steinbiss satta at debian.org
Fri Jun 23 10:15:16 UTC 2017


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satta pushed a commit to branch master
in repository circlator.

commit 90dbc22e2878917e3b43fed89ddc300eb2e0ff7f
Author: Sascha Steinbiss <satta at debian.org>
Date:   Fri Jun 23 12:12:05 2017 +0200

    support Canu as alternative assembler
---
 debian/changelog | 2 ++
 debian/control   | 4 +++-
 2 files changed, 5 insertions(+), 1 deletion(-)

diff --git a/debian/changelog b/debian/changelog
index f617315..35035a0 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -2,6 +2,8 @@ circlator (1.5.1-1) unstable; urgency=medium
 
   * Team upload.
   * New upstream release.
+  * Add Build-dep on canu (for running tests).
+  * Add Suggests on canu (as alternative assembler).
 
  -- Sascha Steinbiss <satta at debian.org>  Fri, 23 Jun 2017 11:59:11 +0200
 
diff --git a/debian/control b/debian/control
index bd3fdc8..c778520 100644
--- a/debian/control
+++ b/debian/control
@@ -18,6 +18,7 @@ Build-Depends:
 	spades,
 	bwa (>= 0.7.12),
 	prodigal,
+    canu
 Standards-Version: 3.9.8
 Homepage: http://sanger-pathogens.github.io/circlator/
 Vcs-Git: https://anonscm.debian.org/git/debian-med/circlator.git
@@ -32,7 +33,8 @@ Depends:
 	bwa (>= 0.7.12),
 	mummer,
 	samtools,
-	spades,
+	spades
+Suggests: canu
 Description: circularize genome assemblies
  Circlator is a tool to automate assembly circularization for bacterial and
  small eukaryotic genomes and produce accurate linear representations of

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