[med-svn] [orthanc-wsi] branch master updated (68ff47c -> 38e6c2f)
Sebastien Jodogne
jodogne-guest at moszumanska.debian.org
Wed Mar 1 12:20:58 UTC 2017
This is an automated email from the git hooks/post-receive script.
jodogne-guest pushed a change to branch master
in repository orthanc-wsi.
from 68ff47c update manpages
new a6e958e added conference paper
new 963c233 New upstream version 0.4+dfsg
new 7eadb82 Merge tag 'upstream/0.4+dfsg'
new 38e6c2f preparing for 0.4+dfsg-1
The 4 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
.hg_archival.txt | 7 +-
AUTHORS | 11 +-
Applications/ApplicationToolbox.cpp | 39 +++++
Applications/ApplicationToolbox.h | 3 +
Applications/CMakeLists.txt | 7 +-
Applications/DicomToTiff.cpp | 2 +
Applications/Dicomizer.cpp | 123 +++++++------
Framework/Algorithms/PyramidReader.cpp | 1 +
Framework/Algorithms/PyramidReader.h | 1 +
Framework/Algorithms/ReconstructPyramidCommand.cpp | 1 +
Framework/Algorithms/ReconstructPyramidCommand.h | 1 +
Framework/Algorithms/TranscodeTileCommand.cpp | 1 +
Framework/Algorithms/TranscodeTileCommand.h | 1 +
Framework/DicomToolbox.cpp | 19 +++
Framework/DicomToolbox.h | 5 +
Framework/DicomizerParameters.cpp | 33 ++--
Framework/DicomizerParameters.h | 1 +
Framework/Enumerations.cpp | 1 +
Framework/Enumerations.h | 1 +
Framework/ImageToolbox.cpp | 22 ++-
Framework/ImageToolbox.h | 1 +
Framework/ImagedVolumeParameters.cpp | 1 +
Framework/ImagedVolumeParameters.h | 1 +
Framework/Inputs/DecodedTiledPyramid.cpp | 1 +
Framework/Inputs/DecodedTiledPyramid.h | 1 +
Framework/Inputs/DicomPyramid.cpp | 1 +
Framework/Inputs/DicomPyramid.h | 1 +
Framework/Inputs/DicomPyramidInstance.cpp | 56 ++++--
Framework/Inputs/DicomPyramidInstance.h | 1 +
Framework/Inputs/DicomPyramidLevel.cpp | 1 +
Framework/Inputs/DicomPyramidLevel.h | 1 +
Framework/Inputs/HierarchicalTiff.cpp | 1 +
Framework/Inputs/HierarchicalTiff.h | 1 +
Framework/Inputs/ITiledPyramid.h | 1 +
Framework/Inputs/OpenSlideLibrary.cpp | 3 +-
Framework/Inputs/OpenSlideLibrary.h | 1 +
Framework/Inputs/OpenSlidePyramid.cpp | 1 +
Framework/Inputs/OpenSlidePyramid.h | 1 +
Framework/Inputs/PyramidWithRawTiles.cpp | 1 +
Framework/Inputs/PyramidWithRawTiles.h | 1 +
Framework/Inputs/SingleLevelDecodedPyramid.cpp | 1 +
Framework/Inputs/SingleLevelDecodedPyramid.h | 1 +
Framework/Inputs/TiledJpegImage.h | 1 +
Framework/Inputs/TiledPngImage.h | 1 +
Framework/Inputs/TiledPyramidStatistics.cpp | 1 +
Framework/Inputs/TiledPyramidStatistics.h | 1 +
Framework/Jpeg2000Reader.cpp | 1 +
Framework/Jpeg2000Reader.h | 1 +
Framework/Jpeg2000Writer.cpp | 1 +
Framework/Jpeg2000Writer.h | 1 +
Framework/Outputs/DicomPyramidWriter.cpp | 8 +-
Framework/Outputs/DicomPyramidWriter.h | 1 +
Framework/Outputs/HierarchicalTiffWriter.cpp | 1 +
Framework/Outputs/HierarchicalTiffWriter.h | 1 +
Framework/Outputs/IPyramidWriter.h | 1 +
Framework/Outputs/InMemoryTiledImage.cpp | 1 +
Framework/Outputs/InMemoryTiledImage.h | 1 +
Framework/Outputs/MultiframeDicomWriter.cpp | 1 +
Framework/Outputs/MultiframeDicomWriter.h | 1 +
Framework/Outputs/PyramidWriterBase.cpp | 1 +
Framework/Outputs/PyramidWriterBase.h | 1 +
Framework/Outputs/TruncatedPyramidWriter.cpp | 1 +
Framework/Outputs/TruncatedPyramidWriter.h | 1 +
Framework/PrecompiledHeadersWSI.cpp | 1 +
Framework/PrecompiledHeadersWSI.h | 1 +
Framework/Targets/FolderTarget.cpp | 1 +
Framework/Targets/FolderTarget.h | 3 +-
Framework/Targets/IFileTarget.h | 1 +
Framework/Targets/OrthancTarget.cpp | 1 +
Framework/Targets/OrthancTarget.h | 5 +-
NEWS | 20 ++-
Resources/CMake/LibTiffConfiguration.cmake | 2 +-
Resources/CMake/OpenJpegConfiguration.cmake | 2 +-
Resources/CMake/Version.cmake | 2 +-
.../Orthanc/Core/Cache/LeastRecentlyUsedIndex.h | 1 +
Resources/Orthanc/Core/ChunkedBuffer.cpp | 1 +
Resources/Orthanc/Core/ChunkedBuffer.h | 1 +
Resources/Orthanc/Core/DicomFormat/DicomArray.cpp | 1 +
Resources/Orthanc/Core/DicomFormat/DicomArray.h | 3 +-
Resources/Orthanc/Core/DicomFormat/DicomElement.h | 1 +
Resources/Orthanc/Core/DicomFormat/DicomMap.cpp | 1 +
Resources/Orthanc/Core/DicomFormat/DicomMap.h | 3 +-
Resources/Orthanc/Core/DicomFormat/DicomTag.cpp | 1 +
Resources/Orthanc/Core/DicomFormat/DicomTag.h | 3 +
Resources/Orthanc/Core/DicomFormat/DicomValue.cpp | 1 +
Resources/Orthanc/Core/DicomFormat/DicomValue.h | 1 +
Resources/Orthanc/Core/Endianness.h | 1 +
Resources/Orthanc/Core/EnumerationDictionary.h | 1 +
Resources/Orthanc/Core/Enumerations.cpp | 12 +-
Resources/Orthanc/Core/Enumerations.h | 1 +
Resources/Orthanc/Core/HttpClient.cpp | 5 +-
Resources/Orthanc/Core/HttpClient.h | 1 +
Resources/Orthanc/Core/ICommand.h | 1 +
Resources/Orthanc/Core/IDynamicObject.h | 1 +
Resources/Orthanc/Core/Images/IImageWriter.cpp | 1 +
Resources/Orthanc/Core/Images/IImageWriter.h | 1 +
Resources/Orthanc/Core/Images/Image.cpp | 1 +
Resources/Orthanc/Core/Images/Image.h | 1 +
Resources/Orthanc/Core/Images/ImageAccessor.cpp | 1 +
Resources/Orthanc/Core/Images/ImageAccessor.h | 1 +
Resources/Orthanc/Core/Images/ImageBuffer.cpp | 1 +
Resources/Orthanc/Core/Images/ImageBuffer.h | 1 +
Resources/Orthanc/Core/Images/ImageProcessing.cpp | 21 +++
Resources/Orthanc/Core/Images/ImageProcessing.h | 1 +
Resources/Orthanc/Core/Images/JpegErrorManager.cpp | 1 +
Resources/Orthanc/Core/Images/JpegErrorManager.h | 1 +
Resources/Orthanc/Core/Images/JpegReader.cpp | 1 +
Resources/Orthanc/Core/Images/JpegReader.h | 1 +
Resources/Orthanc/Core/Images/JpegWriter.cpp | 3 +-
Resources/Orthanc/Core/Images/JpegWriter.h | 1 +
Resources/Orthanc/Core/Images/PngReader.cpp | 1 +
Resources/Orthanc/Core/Images/PngReader.h | 1 +
Resources/Orthanc/Core/Images/PngWriter.cpp | 1 +
Resources/Orthanc/Core/Images/PngWriter.h | 1 +
Resources/Orthanc/Core/Logging.cpp | 70 +++++++-
Resources/Orthanc/Core/Logging.h | 53 +++++-
Resources/Orthanc/Core/MultiThreading/BagOfTasks.h | 1 +
.../Core/MultiThreading/BagOfTasksProcessor.cpp | 1 +
.../Core/MultiThreading/BagOfTasksProcessor.h | 11 +-
.../Orthanc/Core/MultiThreading/Semaphore.cpp | 1 +
Resources/Orthanc/Core/MultiThreading/Semaphore.h | 3 +-
.../Core/MultiThreading/SharedMessageQueue.cpp | 1 +
.../Core/MultiThreading/SharedMessageQueue.h | 1 +
Resources/Orthanc/Core/OrthancException.h | 3 +-
Resources/Orthanc/Core/PrecompiledHeaders.cpp | 1 +
Resources/Orthanc/Core/PrecompiledHeaders.h | 1 +
Resources/Orthanc/Core/SystemToolbox.cpp | 15 +-
Resources/Orthanc/Core/SystemToolbox.h | 3 +
Resources/Orthanc/Core/TemporaryFile.cpp | 1 +
Resources/Orthanc/Core/TemporaryFile.h | 1 +
Resources/Orthanc/Core/Toolbox.cpp | 13 +-
Resources/Orthanc/Core/Toolbox.h | 3 +-
Resources/Orthanc/Core/WebServiceParameters.cpp | 2 +-
Resources/Orthanc/Core/WebServiceParameters.h | 1 +
.../Orthanc/OrthancServer/FromDcmtkBridge.cpp | 122 ++++++++++++-
Resources/Orthanc/OrthancServer/FromDcmtkBridge.h | 25 +++
.../OrthancServer/PrecompiledHeadersServer.h | 1 +
.../Orthanc/OrthancServer/ServerEnumerations.cpp | 3 +
.../Orthanc/OrthancServer/ServerEnumerations.h | 5 +-
Resources/Orthanc/OrthancServer/ToDcmtkBridge.cpp | 19 +--
Resources/Orthanc/OrthancServer/ToDcmtkBridge.h | 3 +-
Resources/Orthanc/Plugins/Engine/SharedLibrary.cpp | 1 +
Resources/Orthanc/Plugins/Engine/SharedLibrary.h | 3 +-
.../Plugins/Samples/Common/DicomDatasetReader.cpp | 83 +++++++--
.../Plugins/Samples/Common/DicomDatasetReader.h | 25 ++-
.../Orthanc/Plugins/Samples/Common/DicomPath.cpp | 5 +-
.../Orthanc/Plugins/Samples/Common/DicomPath.h | 1 +
.../Orthanc/Plugins/Samples/Common/DicomTag.cpp | 5 +-
.../Orthanc/Plugins/Samples/Common/DicomTag.h | 15 +-
.../Plugins/Samples/Common/FullOrthancDataset.cpp | 16 +-
.../Plugins/Samples/Common/FullOrthancDataset.h | 1 +
.../Orthanc/Plugins/Samples/Common/IDicomDataset.h | 1 +
.../Plugins/Samples/Common/IOrthancConnection.cpp | 5 +-
.../Plugins/Samples/Common/IOrthancConnection.h | 1 +
.../Samples/Common/OrthancHttpConnection.cpp | 1 +
.../Plugins/Samples/Common/OrthancHttpConnection.h | 1 +
.../Samples/Common/OrthancPluginConnection.cpp | 9 +-
.../Samples/Common/OrthancPluginConnection.h | 1 +
.../Samples/Common/OrthancPluginCppWrapper.cpp | 190 +++++++++++++++------
.../Samples/Common/OrthancPluginCppWrapper.h | 119 +++++++------
.../Samples/Common/OrthancPluginException.h | 101 +++++++++++
.../Samples/Common/SimplifiedOrthancDataset.cpp | 15 +-
.../Samples/Common/SimplifiedOrthancDataset.h | 1 +
.../Resources/CMake/BoostConfiguration.cmake | 16 +-
.../Resources/CMake/DcmtkConfiguration.cmake | 15 +-
.../Resources/CMake/JsonCppConfiguration.cmake | 2 +-
.../Resources/CMake/LibCurlConfiguration.cmake | 2 +-
.../Resources/CMake/LibJpegConfiguration.cmake | 2 +-
.../Resources/CMake/LibPngConfiguration.cmake | 2 +-
.../Resources/CMake/OpenSslConfiguration.cmake | 2 +-
.../Resources/CMake/ZlibConfiguration.cmake | 2 +-
Resources/Orthanc/Resources/EmbedResources.py | 1 +
.../dcmtk-3.6.0-dulparse-vulnerability.patch | 29 ++++
Resources/Orthanc/Resources/WindowsResources.py | 1 +
Resources/OrthancWSIClearCache.py | 1 +
Resources/SyncOrthancFolder.py | 2 +
TODO | 3 +-
ViewerPlugin/CMakeLists.txt | 5 +-
ViewerPlugin/DicomPyramidCache.cpp | 1 +
ViewerPlugin/DicomPyramidCache.h | 1 +
ViewerPlugin/Plugin.cpp | 1 +
ViewerPlugin/viewer.js | 1 +
debian/changelog | 5 +-
debian/copyright | 4 +-
debian/patches/cmake | 8 +-
debian/upstream/metadata | 8 +-
186 files changed, 1242 insertions(+), 345 deletions(-)
create mode 100644 Resources/Orthanc/Plugins/Samples/Common/OrthancPluginException.h
create mode 100644 Resources/Orthanc/Resources/Patches/dcmtk-3.6.0-dulparse-vulnerability.patch
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