[med-svn] [libvcflib] branch debian/jessie-backports updated (8d09323 -> 9717e53)

[Andreas Tille]

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tille pushed a change to branch debian/jessie-backports
in repository libvcflib.

      from  8d09323   Rebuild for jessie-backports
      adds  12fc53b   Adapt to recent PIE changes in dpkg
      adds  673ca43   d/watch: version=4
      adds  a491465   debhelper 10
      adds  697662d   Remove code copy of libssw
      adds  dd96c44   Imported Upstream version 1.0.0~rc1+dfsg1
      adds  94a0a10   Merge tag 'upstream/1.0.0_rc1+dfsg1'
      adds  47e2b72   Remove code copy of libssw
      adds  280dbff   Add lintian overrides
      adds  10940e6   Upload to unstable
      adds  89fba35   Remove empty upstream/metadata
      adds  a184164   Add pkg-config file for easier usage in freebayes
      adds  782051b   add libsmithwaterman to linker flags
      adds  b13560f   Versioned Depends libsmithwaterman-dev to guarantee that libdisorder will be mentioned in LIBS
      adds  905a78c   Add ldisorder to LIBS
      adds  36a7458   DEP3, upload to experimental
      adds  9c1436d   Revert changes uploaded to experimental to enable fixing bug in unstable targeting at Stretch release
      adds  024d910   Remove empty debian/upstream/metadata file
      adds  29154cc   Fix location of binary tools
      adds  27c21a3   Upload to unstable
       new  fe4cbbc   Merge branch 'master' into debian/jessie-backports
       new  9717e53   Backport to Jessie

The 2 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 debian/changelog                                |  27 +
 debian/compat                                   |   2 +-
 debian/control                                  |   6 +-
 debian/copyright                                |   4 +-
 debian/libvcflib-dev.lintian-overrides          |   1 +
 debian/libvcflib-tools.lintian-overrides        |   1 +
 debian/libvcflib1.lintian-overrides             |   1 +
 debian/patches/series                           |   1 +
 debian/patches/use_debian_packaged_libssw.patch |  23 +
 debian/rules                                    |   3 +-
 debian/upstream/metadata                        |  12 -
 debian/watch                                    |   2 +-
 src/ssw.c                                       | 834 ------------------------
 src/ssw.h                                       | 129 ----
 src/ssw_cpp.cpp                                 | 399 ------------
 src/ssw_cpp.h                                   | 216 ------
 16 files changed, 65 insertions(+), 1596 deletions(-)
 create mode 100644 debian/libvcflib-dev.lintian-overrides
 create mode 100644 debian/libvcflib-tools.lintian-overrides
 create mode 100644 debian/libvcflib1.lintian-overrides
 create mode 100644 debian/patches/use_debian_packaged_libssw.patch
 delete mode 100644 debian/upstream/metadata
 delete mode 100644 src/ssw.c
 delete mode 100644 src/ssw.h
 delete mode 100644 src/ssw_cpp.cpp
 delete mode 100644 src/ssw_cpp.h

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