[med-svn] [runcircos-gui] 02/02: Initial packaging
Andreas Tille
tille at debian.org
Wed Mar 15 12:49:13 UTC 2017
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository runcircos-gui.
commit b5508381d7a0e8c1b890693dce931fbfb1f35881
Author: Andreas Tille <tille at debian.org>
Date: Wed Mar 15 13:48:45 2017 +0100
Initial packaging
---
debian/changelog | 5 +++++
debian/compat | 1 +
debian/control | 26 ++++++++++++++++++++++++++
debian/copyright | 26 ++++++++++++++++++++++++++
debian/get-orig-source | 25 +++++++++++++++++++++++++
debian/install | 1 +
debian/rules | 12 ++++++++++++
debian/source/format | 1 +
debian/source/lintian-overrides | 2 ++
debian/watch | 3 +++
10 files changed, 102 insertions(+)
diff --git a/debian/changelog b/debian/changelog
new file mode 100644
index 0000000..70e3f22
--- /dev/null
+++ b/debian/changelog
@@ -0,0 +1,5 @@
+runcircos-gui (0.0+20160403-1) UNRELEASED; urgency=medium
+
+ * Initial release (Closes: #<bug>)
+
+ -- Andreas Tille <tille at debian.org> Tue, 11 Oct 2016 20:08:16 +0200
diff --git a/debian/compat b/debian/compat
new file mode 100644
index 0000000..ec63514
--- /dev/null
+++ b/debian/compat
@@ -0,0 +1 @@
+9
diff --git a/debian/control b/debian/control
new file mode 100644
index 0000000..f5f0640
--- /dev/null
+++ b/debian/control
@@ -0,0 +1,26 @@
+Source: runcircos-gui
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Andreas Tille <tille at debian.org>
+Section: science
+Priority: optional
+Build-Depends: debhelper (>= 10),
+ qt5-qmake,
+ qt5-default
+Standards-Version: 3.9.8
+Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/runcircos-gui.git
+Vcs-Git: https://anonscm.debian.org/git/debian-med/runcircos-gui.git
+Homepage: https://github.com/narunlifescience/runcircos-gui
+
+Package: runcircos-gui
+Architecture: any
+Depends: ${shlibs:Depends},
+ ${misc:Depends},
+ circos
+Description: GUI tool to run circos
+ runCircos-gui is a simple yet comprehensive crossplatform software to
+ execute Circos from a graphical user interface. The software eliminates
+ the need to use command line for running Circos without compremising the
+ power of complete commandline parameters and options.
+ .
+ runCircos-gui optimize running parameters (both toggle options & options
+ with arguments) and install Perl packages without using command line.
diff --git a/debian/copyright b/debian/copyright
new file mode 100644
index 0000000..723375d
--- /dev/null
+++ b/debian/copyright
@@ -0,0 +1,26 @@
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: runCircos-gui
+Upstream-Contact: Arun Narayanankutty <n.arun.lifescience at gmail.com>
+Source: https://github.com/narunlifescience/runcircos-gui
+
+Files: *
+Copyright: 2014-2016 Arun Narayanankutty <n.arun.lifescience at gmail.com>
+License: GPL-3+
+
+Files: debian/*
+Copyright: 2017 Andreas Tille <tille at debian.org>
+License: GPL-3+
+
+License: GPL-3+
+ runcircos-gui is free software: you can redistribute it and/or modify
+ it under the terms of the GNU General Public License 2 as published by
+ the Free Software Foundation. However GPL version 3, or any other GPL
+ version are icompatible with this software.
+ .
+ runcircos-gui is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+ .
+ On a Debian system the GNU GPL license version 3 is distributed in
+ /usr/share/common-licenses/GPL-3.
diff --git a/debian/get-orig-source b/debian/get-orig-source
new file mode 100755
index 0000000..0ead3b9
--- /dev/null
+++ b/debian/get-orig-source
@@ -0,0 +1,25 @@
+#!/bin/sh -e
+
+COMPRESS=xz
+
+NAME=`dpkg-parsechangelog | awk '/^Source/ { print $2 }'`
+MVERSION=`dpkg-parsechangelog | awk '/^Version:/ { print $2 }' | sed 's/^\([0-9\.]\+\)[+~][-0-9]\+$/\1/'`
+
+mkdir -p ../tarballs
+cd ../tarballs
+# need to clean up the tarballs dir first because upstream tarball might
+# contain a directory with unpredictable name
+rm -rf *
+git clone --quiet https://github.com/narunlifescience/runcircos-gui
+cd $NAME
+VERSION=${MVERSION}+`date -d @$(git show --format="%at" | head -n1) +%Y%m%d`
+# for esthetical reasons set file timestamps (if git-restore-mtime is installed)
+git restore-mtime || true
+cd ..
+TARDIR=${NAME}-${VERSION}
+mv ${NAME} ${TARDIR}
+rm -rf ${TARDIR}/.git
+rm -f ${TARDIR}/jars/*
+
+GZIP="--best --no-name" tar --owner=root --group=root --mode=a+rX -caf "$NAME"_"$VERSION".orig.tar.${COMPRESS} "${TARDIR}"
+rm -rf ${TARDIR}
diff --git a/debian/install b/debian/install
new file mode 100644
index 0000000..78d13c3
--- /dev/null
+++ b/debian/install
@@ -0,0 +1 @@
+src/runcircos-gui usr/bin
diff --git a/debian/rules b/debian/rules
new file mode 100755
index 0000000..3b1d87e
--- /dev/null
+++ b/debian/rules
@@ -0,0 +1,12 @@
+#!/usr/bin/make -f
+
+# DH_VERBOSE := 1
+export LC_ALL=C.UTF-8
+
+export DEB_BUILD_MAINT_OPTIONS=hardening=+all
+
+%:
+ dh $@ --sourcedirectory=src
+
+get-orig-source:
+ . debian/get-orig-source
diff --git a/debian/source/format b/debian/source/format
new file mode 100644
index 0000000..163aaf8
--- /dev/null
+++ b/debian/source/format
@@ -0,0 +1 @@
+3.0 (quilt)
diff --git a/debian/source/lintian-overrides b/debian/source/lintian-overrides
new file mode 100644
index 0000000..9f3cf3c
--- /dev/null
+++ b/debian/source/lintian-overrides
@@ -0,0 +1,2 @@
+# The package just not builds without this dependency - installing its Depends does not help
+runcircos-gui source: build-depends-on-metapackage build-depends: qt5-default
diff --git a/debian/watch b/debian/watch
new file mode 100644
index 0000000..438af9c
--- /dev/null
+++ b/debian/watch
@@ -0,0 +1,3 @@
+version=4
+
+https://github.com/narunlifescience/runcircos-gui/releases .*/archive/.*(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz)
--
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