[med-svn] [eigensoft] branch debian/jessie-backports updated (63a83eb -> 589e436)

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a change to branch debian/jessie-backports
in repository eigensoft.

      from  63a83eb   Build-Depends: s/libgsl-dev/libgsl0-dev/ since Jessie has only this package
      adds  b645e4b   Imported Upstream version 6.1.3+dfsg
      adds  b61063a   Merge tag 'upstream/6.1.3+dfsg'
      adds  b960919   New upstream version (upstream has renamed from .pl to .perl)
      adds  aa59770   New upstream version 6.1.4+dfsg
      adds  1cdc29d   Merge tag 'upstream/6.1.4+dfsg'
      adds  564ceda   New upstream version
      adds  c5835f2   Adapt patches
      adds  eafe5e8   Fix perl interpreter path
      adds  383f868   Upload to unstable
       new  c63838d   Merge branch 'master' into debian/jessie-backports
       new  589e436   Rebuild for jessie-backports. Build-Depends: libgsl-dev

The 2 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 .gitignore                                       |   32 +
 POPGEN/README                                    |    2 +-
 README                                           |   20 +-
 bin/{evec2pca-ped.pl => evec2pca-ped.perl}       |    0
 bin/{evec2pca.pl => evec2pca.perl}               |    0
 bin/{gc.pl => gc.perl}                           |    0
 bin/ploteig                                      |  209 +++
 bin/{smarteigenstrat.pl => smarteigenstrat.perl} |    0
 bin/{smartpca.pl => smartpca.perl}               |    0
 debian/changelog                                 |   21 +
 debian/control                                   |    2 +-
 debian/install                                   |    2 +-
 debian/links                                     |    2 +-
 debian/patches/blas.patch                        |    4 +-
 debian/patches/fix_perl_interpreter.patch        |   12 +
 debian/patches/lapacke.patch                     |    4 +-
 debian/patches/libm.patch                        |    4 +-
 debian/patches/series                            |    1 +
 debian/rules                                     |   10 +-
 include/egsubs.h                                 |   22 +-
 include/strsubs.h                                |  213 ++-
 include/vsubs.h                                  |  507 +++----
 src/Makefile                                     |    4 +-
 src/egsubs.c                                     |  182 +--
 src/nicksrc/strsubs.c                            | 1515 +++++++++++---------
 src/nicksrc/vsubs.c                              | 1642 +++++++++++++---------
 src/pcaselection.c                               |    4 +-
 27 files changed, 2449 insertions(+), 1965 deletions(-)
 create mode 100644 .gitignore
 rename bin/{evec2pca-ped.pl => evec2pca-ped.perl} (100%)
 rename bin/{evec2pca.pl => evec2pca.perl} (100%)
 rename bin/{gc.pl => gc.perl} (100%)
 create mode 100755 bin/ploteig
 rename bin/{smarteigenstrat.pl => smarteigenstrat.perl} (100%)
 rename bin/{smartpca.pl => smartpca.perl} (100%)
 create mode 100644 debian/patches/fix_perl_interpreter.patch

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