[med-svn] [mapdamage] 01/02: add stdin redirect check

[Nadiya Sitdykova]

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rovenskasa-guest pushed a commit to branch master
in repository mapdamage.

commit 30b9e4e4d4d344711b2ec809461b9f119e1a7d72
Author: rovenskasa-guest <rovenskasa at gmail.com>
Date:   Thu Mar 23 21:27:34 2017 -0700

    add stdin redirect check
---
 debian/changelog           | 7 +++++--
 debian/tests/run-unit-test | 3 +++
 2 files changed, 8 insertions(+), 2 deletions(-)

diff --git a/debian/changelog b/debian/changelog
index e10d2f3..31aecc4 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,4 +1,4 @@
-mapdamage (2.0.6+dfsg-2.2) UNRELEASED; urgency=medium
+mapdamage (2.0.6+dfsg-2.3) UNRELEASED; urgency=medium
 
   [ Andreas Tille ]
   * Add simple autopkgtest
@@ -15,7 +15,10 @@ mapdamage (2.0.6+dfsg-2.2) UNRELEASED; urgency=medium
   [ Nadiya Sitdykova ]
   * Move pysam dependency from tests/control to control as it's needed not only for test, but for package
 
- -- rovenskasa-guest <rovenskasa at gmail.com>  Thu, 23 Mar 2017 21:10:36 -0700
+  [ Nadiya Sitdykova ]
+  * Add test checking stdin redirect
+
+ -- rovenskasa-guest <rovenskasa at gmail.com>  Thu, 23 Mar 2017 21:26:03 -0700
 
 mapdamage (2.0.6+dfsg-1) unstable; urgency=medium
 
diff --git a/debian/tests/run-unit-test b/debian/tests/run-unit-test
index 67290a3..286b7d9 100644
--- a/debian/tests/run-unit-test
+++ b/debian/tests/run-unit-test
@@ -26,6 +26,9 @@ fi
 
 mapDamage -d results_pe -y 0.1 --plot-only
 
+echo "checking stdin redirect..."
+cat rescale_test/pe_test/pe.sam | mapDamage -i - -r rescale_test/pe_test/ref.fa
+
 #rm -rf results_pe
 #mapDamage -i rescale_test/pe_test/pe.sam -r rescale_test/pe_test/ref.fa --rescale
 #--rescale doesn't work without R-libraries

-- 
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