[med-svn] [manta] 03/04: Move config to /etc

[Andreas Tille]

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tille pushed a commit to branch master
in repository manta.

commit 639769edb9e56b8dae1a8e867f453035a18965e8
Author: Andreas Tille <tille at debian.org>
Date:   Mon May 1 08:23:30 2017 +0200

    Move config to /etc
---
 debian/patches/config_path.patch | 15 +++++++++++++++
 debian/patches/series            |  1 +
 2 files changed, 16 insertions(+)

diff --git a/debian/patches/config_path.patch b/debian/patches/config_path.patch
new file mode 100644
index 0000000..17c66a5
--- /dev/null
+++ b/debian/patches/config_path.patch
@@ -0,0 +1,15 @@
+Author: Andreas Tille <tille at debian.org>
+Last-Update: Tue, 15 Nov 2016 14:29:08 +0100
+Description: Move config to /etc
+
+--- a/src/python/lib/configureOptions.py
++++ b/src/python/lib/configureOptions.py
+@@ -123,7 +123,7 @@ class ConfigureWorkflowOptions(object) :
+         configFileName=cmdlineScriptName+".ini"
+ 
+         cmdlineScriptDir=os.path.abspath(os.path.dirname(sys.argv[0]))
+-        globalConfigPath=os.path.join(cmdlineScriptDir,configFileName)
++        globalConfigPath=os.path.join('/etc/manta',configFileName)
+         updateIniSections(iniSections,getIniSections(globalConfigPath))
+ 
+         parser=self._getOptionParser(iniSections[primary_section],configFileName, cmdlineScriptDir,
diff --git a/debian/patches/series b/debian/patches/series
index 8e21131..6c1cc14 100644
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -3,3 +3,4 @@ use_debian_packaged_zlib.patch
 use_debian_packaged_htslib.patch
 use_debian_packaged_samtools.patch
 fix_comparison.patch
+config_path.patch

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