[med-svn] [tn-seqexplorer] branch master updated (ceb3432 -> e947b9e)

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a change to branch master
in repository tn-seqexplorer.

      from  ceb3432   Add dependency if new package libexternalsortinginjava-java
       new  938a434   Add libjgoodies-forms-java even if this does not help in this way.
       new  66d1aad   Upstream has tagged the release so use watch and Files-Excluded
       new  71c92bb   New upstream version 1.5+dfsg
       new  e947b9e   Merge tag 'upstream/1.5+dfsg'

The 4 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 .gitignore                                         |  19 +
 debian/changelog                                   |   2 +-
 debian/control                                     |   3 +-
 debian/copyright                                   |   8 +-
 debian/get-orig-source                             |  28 -
 debian/rules                                       |   2 +-
 debian/watch                                       |   6 +-
 src/resources/bowtie-bin/linux/bowtie2             | 583 ---------------------
 src/resources/bowtie-bin/linux/bowtie2-align-l     | Bin 11241470 -> 0 bytes
 src/resources/bowtie-bin/linux/bowtie2-align-s     | Bin 11227955 -> 0 bytes
 src/resources/bowtie-bin/linux/bowtie2-build       |  98 ----
 src/resources/bowtie-bin/linux/bowtie2-build-l     | Bin 3400174 -> 0 bytes
 src/resources/bowtie-bin/linux/bowtie2-build-s     | Bin 3420470 -> 0 bytes
 src/resources/bowtie-bin/mac/bowtie2               | 583 ---------------------
 src/resources/bowtie-bin/mac/bowtie2-align-l       | Bin 1113520 -> 0 bytes
 src/resources/bowtie-bin/mac/bowtie2-align-s       | Bin 1109448 -> 0 bytes
 src/resources/bowtie-bin/mac/bowtie2-build         |  98 ----
 src/resources/bowtie-bin/mac/bowtie2-build-l       | Bin 374916 -> 0 bytes
 src/resources/bowtie-bin/mac/bowtie2-build-s       | Bin 370340 -> 0 bytes
 .../bowtie-bin/win-64/bowtie2-align-s.exe          | Bin 31967831 -> 0 bytes
 .../bowtie-bin/win-64/bowtie2-build-s.exe          | Bin 11328963 -> 0 bytes
 src/resources/bwa-0.7.5a.tar.bz2                   | Bin 149887 -> 0 bytes
 src/resources/done.gif                             | Bin 534 -> 0 bytes
 src/resources/info.png                             | Bin 7795 -> 0 bytes
 src/resources/install-bwa-redhat.sh                |  36 --
 src/resources/install-bwa-ubuntu.sh                |  38 --
 src/resources/legaldisclaimer.png                  | Bin 8863 -> 0 bytes
 src/resources/load.gif                             | Bin 1849 -> 0 bytes
 28 files changed, 31 insertions(+), 1473 deletions(-)
 create mode 100644 .gitignore
 delete mode 100755 debian/get-orig-source
 delete mode 100755 src/resources/bowtie-bin/linux/bowtie2
 delete mode 100755 src/resources/bowtie-bin/linux/bowtie2-align-l
 delete mode 100755 src/resources/bowtie-bin/linux/bowtie2-align-s
 delete mode 100755 src/resources/bowtie-bin/linux/bowtie2-build
 delete mode 100755 src/resources/bowtie-bin/linux/bowtie2-build-l
 delete mode 100755 src/resources/bowtie-bin/linux/bowtie2-build-s
 delete mode 100644 src/resources/bowtie-bin/mac/bowtie2
 delete mode 100644 src/resources/bowtie-bin/mac/bowtie2-align-l
 delete mode 100644 src/resources/bowtie-bin/mac/bowtie2-align-s
 delete mode 100644 src/resources/bowtie-bin/mac/bowtie2-build
 delete mode 100644 src/resources/bowtie-bin/mac/bowtie2-build-l
 delete mode 100644 src/resources/bowtie-bin/mac/bowtie2-build-s
 delete mode 100644 src/resources/bowtie-bin/win-64/bowtie2-align-s.exe
 delete mode 100644 src/resources/bowtie-bin/win-64/bowtie2-build-s.exe
 delete mode 100644 src/resources/bwa-0.7.5a.tar.bz2
 delete mode 100644 src/resources/done.gif
 delete mode 100644 src/resources/info.png
 delete mode 100644 src/resources/install-bwa-redhat.sh
 delete mode 100644 src/resources/install-bwa-ubuntu.sh
 delete mode 100644 src/resources/legaldisclaimer.png
 delete mode 100644 src/resources/load.gif

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/tn-seqexplorer.git