[med-svn] [canu] branch master updated (eb38c3a -> 84c922b)

[Afif Elghraoui]

This is an automated email from the git hooks/post-receive script.

afif pushed a change to branch master
in repository canu.

      from  eb38c3a   Prepare new revision
       new  01c6107   Update and refresh patches
       new  744a6d9   Match upstream source -- merge conflict didn't work out properly
       new  1311ff3   Update copyright year
       new  84c922b   releasing package canu version 1.5+dfsg-1

The 4 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 debian/changelog                                |   6 +-
 debian/copyright                                |   2 +-
 debian/patches/external-deps.patch              |   2 +-
 debian/patches/fix-build-system.patch           |  32 -----
 debian/patches/relative-paths.patch             |   4 +-
 debian/patches/series                           |   1 -
 debian/patches/use-debian-mhap-at-runtime.patch |  16 +--
 src/AS_global.C                                 |   1 -
 src/bogart/AS_BAT_BestOverlapGraph.C            |   2 -
 src/overlapInCore/overlapPair.C                 |  10 +-
 src/pipelines/canu/Defaults.pm                  | 162 ------------------------
 src/stores/ovStore.H                            |   6 -
 12 files changed, 20 insertions(+), 224 deletions(-)
 delete mode 100644 debian/patches/fix-build-system.patch

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