[med-svn] [r-bioc-biomart] branch master updated (3fd7b92 -> 9844519)

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a change to branch master
in repository r-bioc-biomart.

      from  3fd7b92   Standards-Version: 4.1.1; upload to unstable
       new  2380ae3   New upstream version 2.34.0
       new  347cd6c   Update upstream source from tag 'upstream/2.34.0'
       new  cff43df   New upstream version
       new  fa0d107   New Build-Depends: r-cran-progress, r-cran-stringr
       new  9844519   Upload to unstable

The 5 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 DESCRIPTION                          |   6 +-
 NAMESPACE                            |  12 +-
 NEWS                                 |  21 ++
 R/biomaRt.R                          | 317 ++++++++++--------------
 R/ensembl.R                          |  24 ++
 R/methods-Mart.R                     |  20 +-
 R/utilityFunctions.R                 | 115 ++++++++-
 build/vignette.rds                   | Bin 211 -> 212 bytes
 debian/changelog                     |   7 +
 debian/control                       |   4 +-
 inst/doc/biomaRt.R                   |  13 +-
 inst/doc/biomaRt.Rmd                 |  20 +-
 inst/doc/biomaRt.html                | 464 +++++++++++++++++++++++------------
 man/listEnsemblArchives.Rd           |  18 ++
 man/listMarts.Rd                     |   6 +-
 man/useMart.Rd                       |   2 +-
 tests/testthat/test_hostProcessing.R |  16 ++
 tests/testthat/test_useMart.R        |  13 +
 vignettes/biomaRt.Rmd                |  20 +-
 19 files changed, 731 insertions(+), 367 deletions(-)
 create mode 100644 R/ensembl.R
 create mode 100644 man/listEnsemblArchives.Rd
 create mode 100644 tests/testthat/test_hostProcessing.R
 create mode 100644 tests/testthat/test_useMart.R

-- 
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