[med-svn] [r-bioc-variantannotation] 03/05: Update upstream source from tag 'upstream/1.24.1'

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a commit to branch master
in repository r-bioc-variantannotation.

commit 15849c3487bd7e187e0545201593798b0b32be5e
Merge: 5b617f9 1e3ba2e
Author: Andreas Tille <tille at debian.org>
Date:   Thu Nov 9 10:00:58 2017 +0100

    Update upstream source from tag 'upstream/1.24.1'
    
    Update to upstream version '1.24.1'
    with Debian dir f4421a38f267c17faeeac2b822d347f654261464

 DESCRIPTION                      |   4 +--
 NAMESPACE                        |   2 +-
 NEWS                             |  29 ++++++++++++++++
 R/AllClasses.R                   |   4 +--
 R/methods-VCF-class.R            |  37 +++++++++++++--------
 R/methods-VCFHeader-class.R      |   6 ++--
 R/methods-VRangesList-class.R    |   3 ++
 R/methods-VcfFile.R              |   7 ++--
 R/methods-locateVariants.R       |   2 +-
 build/vignette.rds               | Bin 270 -> 271 bytes
 inst/doc/VariantAnnotation.pdf   | Bin 203450 -> 203854 bytes
 inst/doc/filterVcf.pdf           | Bin 176665 -> 176665 bytes
 inst/unitTests/test_VCF-class.R  |   2 +-
 man/VCF-class.Rd                 |  69 ++++++++++++++++++++++++---------------
 man/VRangesList-class.Rd         |  18 ++++++++++
 man/summarizeVariants-methods.Rd |   3 +-
 16 files changed, 131 insertions(+), 55 deletions(-)

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/r-bioc-variantannotation.git