[med-svn] [r-bioc-annotationhub] branch master updated (4c50c50 -> 1801906)

[Andreas Tille]

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tille pushed a change to branch master
in repository r-bioc-annotationhub.

      from  4c50c50   Upload to unstable
       new  b62f319   Secure URI in watch file
       new  dff0956   New upstream version 2.10.1
       new  af532f9   Update upstream source from tag 'upstream/2.10.1'
       new  aa2d51c   New upstream version
       new  1801906   Upload to unstable

The 5 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
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Summary of changes:
 DESCRIPTION                             |  17 +-
 NAMESPACE                               |   4 +-
 NEWS                                    |  36 ++++
 R/AnnotationHub-class.R                 |  42 +---
 R/AnnotationHubResource-class.R         |  21 ++
 R/Hub-class.R                           |  49 ++++-
 R/cache-utils.R                         |   2 +-
 R/db-utils.R                            |   8 +-
 R/readMetadataFromCsv.R                 |  83 ++++++++
 R/sql-utils.R                           |   2 -
 R/utilities.R                           |  18 +-
 build/vignette.rds                      | Bin 287 -> 339 bytes
 debian/changelog                        |   7 +
 debian/watch                            |   2 +-
 inst/doc/AnnotationHub-HOWTO.R          |   4 +-
 inst/doc/AnnotationHub-HOWTO.Rmd        |   4 +-
 inst/doc/AnnotationHub-HOWTO.html       | 232 ++++++++++++++------
 inst/doc/AnnotationHub.R                |  42 ++--
 inst/doc/AnnotationHub.html             | 300 +++++++++++++++++---------
 inst/doc/CreateAnAnnotationPackage.R    |  25 +++
 inst/doc/CreateAnAnnotationPackage.Rmd  | 354 +++++++++++++++++++++++++++++++
 inst/doc/CreateAnAnnotationPackage.html | 364 ++++++++++++++++++++++++++++++++
 man/AnnotationHub-class.Rd              |  21 +-
 man/AnnotationHub-package.Rd            |  10 +-
 man/AnnotationHubResource-class.Rd      |  39 +---
 man/listResources.Rd                    |  54 +----
 man/readMetadataFromCsv.Rd              | 194 +++++++++++++++++
 vignettes/AnnotationHub-HOWTO.Rmd       |   4 +-
 vignettes/CreateAnAnnotationPackage.Rmd | 354 +++++++++++++++++++++++++++++++
 29 files changed, 1939 insertions(+), 353 deletions(-)
 create mode 100644 R/readMetadataFromCsv.R
 create mode 100644 inst/doc/CreateAnAnnotationPackage.R
 create mode 100644 inst/doc/CreateAnAnnotationPackage.Rmd
 create mode 100644 inst/doc/CreateAnAnnotationPackage.html
 create mode 100644 man/readMetadataFromCsv.Rd
 create mode 100644 vignettes/CreateAnAnnotationPackage.Rmd

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