[med-svn] [r-bioc-reactome.db] 03/03: Modernize packaging

Andreas Tille tille at debian.org
Fri Nov 17 13:38:55 UTC 2017


This is an automated email from the git hooks/post-receive script.

tille pushed a commit to branch master
in repository r-bioc-reactome.db.

commit 9790c9b375c587c862df8c442a0626b5f9c73a7e
Author: Andreas Tille <tille at debian.org>
Date:   Fri Nov 17 14:39:14 2017 +0100

    Modernize packaging
---
 debian/changelog |  6 +++++-
 debian/compat    |  2 +-
 debian/control   | 17 +++++++++--------
 debian/rules     |  5 +++--
 4 files changed, 18 insertions(+), 12 deletions(-)

diff --git a/debian/changelog b/debian/changelog
index fef737f..c5eaf6f 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,5 +1,9 @@
-r-bioc-reactome.db (1.46.1-1) UNRELEASED; urgency=low
+r-bioc-reactome.db (1.62.0-1) UNRELEASED; urgency=low
 
   * Initial release (closes: #???)
+  Remark: It is not intended to upload this 800MB data package but
+  the packaging is provided to run some test suites for instance for
+  r-bioc-annotationdbi
+  * Moved packaging from SVN to Git
 
  -- Andreas Tille <tille at debian.org>  Thu, 16 Jan 2014 14:13:14 +0100
diff --git a/debian/compat b/debian/compat
index ec63514..f599e28 100644
--- a/debian/compat
+++ b/debian/compat
@@ -1 +1 @@
-9
+10
diff --git a/debian/control b/debian/control
index 2ba7811..ce04651 100644
--- a/debian/control
+++ b/debian/control
@@ -2,21 +2,22 @@ Source: r-bioc-reactome.db
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 Uploaders: Andreas Tille <tille at debian.org>
 Section: gnu-r
+Testsuite: autopkgtest-pkg-r
 Priority: optional
-Build-Depends: debhelper (>= 9),
-               cdbs,
-               r-base-dev,
+Build-Depends: debhelper (>= 10),
+               dh-r,
                r-bioc-annotationdbi
-Standards-Version: 3.9.5
-Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-reactome.db/trunk/
-Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-reactome.db/trunk/
+Standards-Version: 4.1.1
+Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/r-bioc-reactome.db.git
+Vcs-Git: https://anonscm.debian.org/git/debian-med/r-bioc-reactome.db.git
 Homepage: http://www.bioconductor.org/packages/release/data/annotation/html/reactome.db.html
 
 Package: r-bioc-reactome.db
 Architecture: all
 Depends: ${R:Depends},
-         ${misc:Depends},
-         r-bioc-annotationdbi
+         ${misc:Depends}
+Recommends: ${R:Recommends}
+Suggests: ${R:Suggests}
 Description: set of annotation maps for reactome
  This package is part of BioConductor and provides a set of annotation
  maps for reactome assembled using data from reactome.
diff --git a/debian/rules b/debian/rules
index aeb12b3..529c38a 100755
--- a/debian/rules
+++ b/debian/rules
@@ -1,4 +1,5 @@
 #!/usr/bin/make -f
 
-debRreposname=bioc
-include /usr/share/R/debian/r-cran.mk
+%:
+	dh $@ --buildsystem R
+

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/r-bioc-reactome.db.git



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