[med-svn] [subread] 06/10: Add man page generation for sublong binary

[Alex Mestiashvili]

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malex-guest pushed a commit to branch master
in repository subread.

commit 4fdd0268a62e8ac3763a226ee8c3bf162f2076e3
Author: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
Date:   Fri Nov 17 15:48:39 2017 +0100

    Add man page generation for sublong binary
---
 debian/filter.pl | 2 ++
 debian/rules     | 3 +++
 2 files changed, 5 insertions(+)

diff --git a/debian/filter.pl b/debian/filter.pl
index 367f95a..5a7a33c 100755
--- a/debian/filter.pl
+++ b/debian/filter.pl
@@ -44,5 +44,7 @@ while ( <STDIN> ) {
     s/For\ more\ information\ about\ these\ arguments.*//xms;
 	# remove duplicated parts
 	s/Usage:\n\.IP.*//xms;
+	# remove duplicated output of sublong
+	s/(\#\#\sMandatory\sarguments\:).*(\g{1})/$2/gxms;
     print;
 }
diff --git a/debian/rules b/debian/rules
index fdd42ff..b8846e0 100755
--- a/debian/rules
+++ b/debian/rules
@@ -59,6 +59,9 @@ DNA-seq reads and RNA-seq reads (for the purpose of expression analysis)' \
 	$(HELP2MAN) --name='detect short and long indels' \
 	$(bindir)/subindel | debian/filter.pl > $(mandir)/subindel.1;
 
+	$(HELP2MAN) --name='long-read aligner that is designed based on seed-and-vote' \
+	$(bindir)/sublong| debian/filter.pl > $(mandir)/sublong.1;
+
 	$(HELP2MAN) --name='scans the entire genome and reports all matches of a specified sequence' \
 	$(utildir)/subread-fullscan | debian/filter.pl > $(mandir)/subread-fullscan.1;
 

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