[med-svn] [seqan2] branch experimental updated (a3a2a49 -> e3e3df8)

[Michael Crusoe]

This is an automated email from the git hooks/post-receive script.

misterc-guest pushed a change to branch experimental
in repository seqan2.

      from  a3a2a49   skip yara on armhf, sh4
      adds  d555c95   Skip yara on armel
      adds  b94ee53   New upstream version 2.3.2.000platform-issues4-fba8744+dfsg
      adds  5eef82a   Update upstream source from tag 'upstream/2.3.2.000platform-issues4-fba8744+dfsg'
      adds  896e60b   freshen upstream
      adds  f060509   Add test on sparc64 to aid debugging
      adds  082378d   update sparc64 test, defines as per upstream
      adds  e3580d1   New upstream version 2.3.2.000platform-issues5-86390dc+dfsg
      adds  069f08d   Update upstream source from tag 'upstream/2.3.2.000platform-issues5-86390dc+dfsg'
      adds  9e19748   Another update from upstream
      adds  49e1ab6   cleanup env vars
      adds  8b125f4   Skip yara on kfreebsd-i386
      adds  06d2ec6   Try out -O2 on archs that had been previously -O1
      adds  b2ca48c   use seqan's built in manpage support
      adds  723871c   fix typo
      adds  c1d8a21   New upstream version 2.3.2.000platform-issues6-9cf5a69+dfsg
      adds  072ceb6   Update upstream source from tag 'upstream/2.3.2.000platform-issues6-9cf5a69+dfsg'
      adds  56831a0   From upstream: another round of changes for the problems that affect all big endian.
      adds  1bff7cf   -O3 for all, delete broken symlinks to fix manpage generation
      adds  e3e3df8   type fix

No new revisions were added by this update.

Summary of changes:
 apps/yara/tests/run_tests.py                | 16 ++++++------
 debian/README.Debian                        | 15 ++++--------
 debian/changelog                            | 38 +++++++++++++++++++++++++++++
 debian/control                              |  1 +
 debian/generate_manpages                    | 11 ++-------
 debian/patches/series                       |  1 +
 debian/patches/skip-some-apps-on-some-archs | 12 ++++++++-
 debian/patches/spelling                     | 13 ++++++++++
 debian/rules                                | 30 +++++++++++++++--------
 debian/source/lintian-overrides             |  2 +-
 include/seqan/bam_io/bam_alignment_record.h | 12 ++++++---
 include/seqan/bam_io/bam_index_bai.h        |  2 +-
 include/seqan/bam_io/bam_tags_dict.h        |  1 +
 include/seqan/bam_io/read_bam.h             |  1 +
 include/seqan/platform.h                    |  7 +++++-
 include/seqan/seq_io/bam_sam.h              |  1 +
 tests/bam_io/test_bam_sam_conversion.h      | 11 ++++++++-
 17 files changed, 129 insertions(+), 45 deletions(-)
 create mode 100644 debian/patches/spelling

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