[med-svn] [bart] annotated tag v0.4.01 created (now 6cc82bf)
Martin Uecker
uecker-guest at moszumanska.debian.org
Sun Nov 26 12:08:04 UTC 2017
This is an automated email from the git hooks/post-receive script.
uecker-guest pushed a change to annotated tag v0.4.01
in repository bart.
at 6cc82bf (tag)
tagging 325932321fb8bd2b42d34effa0e8823a5d5ad277 (commit)
replaces v0.4.00
tagged by Martin Uecker
on Fri Jun 23 13:13:30 2017 +0200
- Log -----------------------------------------------------------------
version 0.4.01
Changes:
- new tools: casorati mandelbrot wavelet estshift estdelay ccapply
- cc tool: new option to output compression matrix
- traj tool: new option for gradient-error corrected radial trajectories
- pics tool: fix for the use of weights for non-Cartesian trajectories
- pics tool: fix for the use of weights with higher (temporal) dimensions (Jon Tamir)
- pics tool: allow the use of higher dimensions in sensitivity maps (Jon Tamir)
- nlinv tool: various fixes (Christian Holme)
- threshold tool: fix for hard thresholding (Jon Tamir)
- cmake: integration testing (Damien Nguyen)
- cmake: CUDA support (Damien Nguyen)
- fixes for a couple of memory leaks (Damien Nguyen, Christian Holme)
- faster system tests, more unit tests and system tests
- library: improved precision of wavelet filters
- library: new functions for tensor multiplication (md_ztenmul, ...)
- library: function to compute sensitivities with Biot-Savart law
- library: functions for polynoms
- library: improved and extended functions for splines
- many other bug fixes and improvements
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Christian Holme (5):
fix segfault in nufft_precond_create
fix subopt (#77)
fix nlinv bug
add SLICE_FLAG
add test for NLINV
Jon Tamir (8):
threshold: missing break for hard threshold
wavelet3: change debug level
ccapply tool to apply coil compression matrix (#75)
fix issue #79 pics over time with weights (#80)
pics: support higher dimensions for maps (#81)
casorati tool (#82)
minor comment fix
add cmake build to travis
Martin Uecker (96):
add operator_bind2 function
add operator_p_upcast function
add prox_nonneg_create function
add missing PTR_PASS
L1 Laplace regularization
add MD_SINGLETON macros
make convolutions more flexible
missing free
admm: split variables
mandelbrot tool
adapt debug putput for CUDA
improve scaling
ecalib: replace assert by error
type safety
remove wavelet2
completely turn of batch loop if not needed
document how to save using debugger
cc: explicit option to output compression matrix
more tests for cc/ccapply
version: add compiler version
simple vec3 function
biot savart law
simple coil simulation
rename biots.[ch] -> biot_savart.[ch] and headers
update spline code
polynoms
utest: nicer output
remove obsolete functions
fix duplicated option
add set -e to script
sanity check cli options
fix duplicated option
type safety
fix indentation
add laplace filter in k-space with scaling parameter
comments for fall through in switch statements
est delay command
simple quadratic forms
gradient delays
gradient delays
tool for estimation of gradient delays from radial data
shut up warning
correct transverse gradient errors
remove old code
update itsense
remove old water/fat code
minor
add assertion to md_circ_shift
fix potential memory leak in conjugate gradients (courtesy of Christian Holme)
introduce defaults for irgnm
use defaults in nlinv
irgnm: config for cg
irgnm: nlinv legacy mode (courtesy of Christian Holme)
per dimension rand shifts (fixes shifts exceeding size)
logo
Computational MRI
reseach use
debug output for chain
sense_recon: use linop_(co)domain
function to compute non-trival dims: md_nontriv_dims
use md_notriv_dims
copy parameters in waveop
wavelet tool
improve precision of wavelet filter
improve test for pics with weights
fix weights for non-Cartesian
tests: rename intermediate file
tests: remove redundancy
tests: remove more redundancy
set std=gnu11 (which we use anyway)
fix warning
correct type for linop_get_data
function md_max_dims
function md_matmul_dims
add test for linop_matrix
fix md_gaussian_rand
tests for linear operators
more unit tests for linop_matrix
test matrix chain
redesign linop_matrix
smaller unit tests
export simplify_dims
test case for blas matrix multiply, fix prototype
optimize simple matrix multiplication with blas
linop_matrix: refactoring part II
linop_matrix: cuda support
optimize transpose case
introduce tenmul as a replacement for matmul
use tenmul
use tenmul in benchmark tool
fix arguments swapped in blas matrix test
refactor
turn off failing unit tests on Mac
relax gpu test for non-Cartesian with weights a bit
clean utest object files
bump version
Nguyen Damien (2):
Fix a few memory leaks, possible stack smashing and an initialization bug in release (#84)
Enable CUDA compilation when using cmake (#83)
frankong (1):
cleanup nufft phase cycle
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