[med-svn] [r-cran-ade4] 08/12: Updated version 1.7-8 from 'upstream/1.7-8'

Andreas Tille tille at debian.org
Wed Nov 29 13:30:50 UTC 2017


This is an automated email from the git hooks/post-receive script.

tille pushed a commit to branch master
in repository r-cran-ade4.

commit 1c99a463f14ac81c02bfa8a31fd8fdc461b1bd3c
Merge: 4658b52 73a6e11
Author: Andreas Tille <tille at debian.org>
Date:   Wed Nov 29 14:25:53 2017 +0100

    Updated version 1.7-8 from 'upstream/1.7-8'
    
    with Debian dir 01e206803639730a77c191cfa84d3ea3fecb0c2a

 ChangeLog                     | 2354 +++++++++++++++++++++++++++++
 DESCRIPTION                   |   21 +
 MD5                           |  618 ++++++++
 NAMESPACE                     |  286 ++++
 R/EH.R                        |   22 +
 R/PI2newick.R                 |   64 +
 R/RV.rtest.R                  |   25 +
 R/RVdist.randtest.R           |   18 +
 R/add.scatter.R               |   90 ++
 R/amova.R                     |  217 +++
 R/apqe.R                      |  100 ++
 R/area.plot.R                 |  277 ++++
 R/as.taxo.R                   |   43 +
 R/bca.rlq.R                   |  137 ++
 R/between.R                   |  139 ++
 R/betweencoinertia.R          |  173 +++
 R/betwitdpcoa.R               |  261 ++++
 R/bicenter.wt.R               |   21 +
 R/cailliez.R                  |   26 +
 R/coinertia.R                 |  278 ++++
 R/combine.4thcorner.R         |   94 ++
 R/corkdist.R                  |  176 +++
 R/costatis.R                  |  101 ++
 R/disc.R                      |   68 +
 R/discrimin.R                 |  134 ++
 R/discrimin.coa.R             |   68 +
 R/dist.binary.R               |   94 ++
 R/dist.dudi.R                 |   30 +
 R/dist.genet.R                |  104 ++
 R/dist.ktab.R                 | 3350 +++++++++++++++++++++++++++++++++++++++++
 R/dist.neig.R                 |   18 +
 R/dist.prop.R                 |   83 +
 R/dist.quant.R                |   55 +
 R/divc.R                      |   26 +
 R/divcmax.R                   |  101 ++
 R/dotchart.phylog.R           |  102 ++
 R/dotcircle.R                 |   44 +
 R/dpcoa.R                     |  160 ++
 R/dudi.R                      |  269 ++++
 R/dudi.acm.R                  |  116 ++
 R/dudi.coa.R                  |   27 +
 R/dudi.dec.R                  |   33 +
 R/dudi.fca.R                  |  133 ++
 R/dudi.hillsmith.R            |  100 ++
 R/dudi.mix.R                  |  126 ++
 R/dudi.nsc.R                  |   19 +
 R/dudi.pca.R                  |   32 +
 R/dudi.pco.R                  |  112 ++
 R/foucart.R                   |  179 +++
 R/fourthcorner.R              |  291 ++++
 R/fourthcorner.rlq.R          |  310 ++++
 R/fourthcorner2.R             |  218 +++
 R/fuzzygenet.R                |  143 ++
 R/gearymoran.R                |   28 +
 R/genet.R                     |  375 +++++
 R/gridrowcol.R                |  107 ++
 R/inertia.dudi.R              |  161 ++
 R/is.euclid.R                 |   31 +
 R/kdist.R                     |  269 ++++
 R/kdist2ktab.R                |   47 +
 R/kdisteuclid.R               |   64 +
 R/kplot.R                     |    3 +
 R/kplot.foucart.R             |   28 +
 R/kplot.mcoa.R                |   61 +
 R/kplot.mfa.R                 |   39 +
 R/kplot.pta.R                 |   72 +
 R/kplot.sepan.R               |  104 ++
 R/kplot.statis.R              |   48 +
 R/krandboot.R                 |   32 +
 R/krandtest.R                 |  120 ++
 R/krandxval.R                 |   40 +
 R/ktab.R                      |  332 ++++
 R/ktab.data.frame.R           |   43 +
 R/ktab.list.df.R              |   51 +
 R/ktab.list.dudi.R            |   44 +
 R/ktab.match2ktabs.R          |   58 +
 R/ktab.within.R               |   41 +
 R/lingoes.R                   |   24 +
 R/mantel.randtest.R           |   15 +
 R/mantel.rtest.R              |   38 +
 R/mbpcaiv.R                   |  248 +++
 R/mbpls.R                     |  239 +++
 R/mcoa.R                      |  331 ++++
 R/mdpcoa.R                    |  226 +++
 R/mfa.R                       |  231 +++
 R/mld.R                       |  136 ++
 R/mstree.R                    |   17 +
 R/multiblock.R                |  216 +++
 R/multispati.R                |  211 +++
 R/multispati.randtest.R       |   35 +
 R/multispati.rtest.R          |   33 +
 R/neig.R                      |  228 +++
 R/newick2phylog.R             |  570 +++++++
 R/niche.R                     |  159 ++
 R/nipals.R                    |  134 ++
 R/optimEH.R                   |   39 +
 R/originality.R               |  146 ++
 R/orisaved.R                  |   27 +
 R/orthobasis.R                |  351 +++++
 R/orthogram.R                 |  183 +++
 R/p.adjust.4thcorner.R        |   40 +
 R/pcaiv.R                     |  189 +++
 R/pcaivortho.R                |   82 +
 R/pcoscaled.R                 |   27 +
 R/phylog.R                    |  281 ++++
 R/plot.4thcorner.R            |  235 +++
 R/plot.phylog.R               |  263 ++++
 R/print.4thcorner.R           |   46 +
 R/procuste.R                  |  149 ++
 R/procuste.randtest.R         |   25 +
 R/procuste.rtest.R            |   29 +
 R/pta.R                       |  298 ++++
 R/quasieuclid.R               |   17 +
 R/randEH.R                    |   30 +
 R/randboot.R                  |   29 +
 R/randtest-internal.R         |  146 ++
 R/randtest.R                  |   78 +
 R/randtest.amova.R            |   34 +
 R/randtest.between.R          |   24 +
 R/randtest.coinertia.R        |   81 +
 R/randtest.discrimin.R        |   26 +
 R/randtest.dpcoa.R            |   50 +
 R/randtest.pcaiv.R            |   27 +
 R/randtest.pcaivortho.R       |   29 +
 R/randtest.rlq.R              |  121 ++
 R/randxval.R                  |   26 +
 R/reconst.R                   |   51 +
 R/rlq.R                       |  199 +++
 R/rtest.R                     |    3 +
 R/rtest.between.R             |   38 +
 R/rtest.discrimin.R           |   47 +
 R/s.arrow.R                   |   45 +
 R/s.chull.R                   |   28 +
 R/s.class.R                   |   50 +
 R/s.corcircle.R               |   91 ++
 R/s.distri.R                  |   48 +
 R/s.hist.R                    |   89 ++
 R/s.image.R                   |   51 +
 R/s.kde2d.R                   |   52 +
 R/s.label.R                   |   39 +
 R/s.logo.R                    |   83 +
 R/s.match.R                   |   57 +
 R/s.match.class.R             |   81 +
 R/s.multinom.R                |  112 ++
 R/s.traject.R                 |   81 +
 R/s.value.R                   |   89 ++
 R/scalewt.R                   |  173 +++
 R/scatter.R                   |    2 +
 R/scatter.acm.R               |   24 +
 R/scatter.coa.R               |   38 +
 R/scatter.dudi.R              |   25 +
 R/scatter.fca.R               |   15 +
 R/scatterutil.R               |  689 +++++++++
 R/sco.boxplot.R               |   79 +
 R/sco.class.R                 |  106 ++
 R/sco.distri.R                |   83 +
 R/sco.gauss.R                 |   57 +
 R/sco.label.R                 |   91 ++
 R/sco.match.R                 |  100 ++
 R/sco.quant.R                 |   34 +
 R/score.R                     |   65 +
 R/score.acm.R                 |   34 +
 R/score.coa.R                 |  185 +++
 R/score.mix.R                 |   78 +
 R/score.pca.R                 |   31 +
 R/sepan.R                     |  151 ++
 R/statico.R                   |   77 +
 R/statis.R                    |  206 +++
 R/summary.4thcorner.R         |   38 +
 R/supcol.R                    |   36 +
 R/supdist.R                   |   66 +
 R/suprow.R                    |  143 ++
 R/symbols.phylog.R            |  146 ++
 R/table.cont.R                |   62 +
 R/table.dist.R                |   21 +
 R/table.paint.R               |   28 +
 R/table.phylog.R              |  139 ++
 R/table.value.R               |  208 +++
 R/testdim.R                   |   42 +
 R/triangle.class.R            |   95 ++
 R/triangle.plot.R             |  285 ++++
 R/uniquewt.df.R               |   15 +
 R/utilities.R                 |   48 +
 R/variance.phylog.R           |   58 +
 R/varipart.R                  |   57 +
 R/wca.rlq.R                   |  137 ++
 R/within.R                    |  134 ++
 R/withincoinertia.R           |  178 +++
 R/withinpca.R                 |   56 +
 R/witwit.R                    |  126 ++
 R/witwitsepan.R               |   57 +
 data/abouheif.eg.rda          |  Bin 0 -> 414 bytes
 data/acacia.rda               |  Bin 0 -> 614 bytes
 data/aminoacyl.rda            |  Bin 0 -> 3359 bytes
 data/apis108.rda              |  Bin 0 -> 2004 bytes
 data/aravo.rda                |  Bin 0 -> 6151 bytes
 data/ardeche.rda              |  Bin 0 -> 1594 bytes
 data/arrival.rda              |  Bin 0 -> 790 bytes
 data/atlas.rda                |  Bin 0 -> 6145 bytes
 data/atya.rda                 |  Bin 0 -> 1928 bytes
 data/avijons.rda              |  Bin 0 -> 15850 bytes
 data/avimedi.rda              |  Bin 0 -> 3871 bytes
 data/aviurba.rda              |  Bin 0 -> 2679 bytes
 data/bacteria.rda             |  Bin 0 -> 9468 bytes
 data/banque.rda               |  Bin 0 -> 7765 bytes
 data/baran95.rda              |  Bin 0 -> 2581 bytes
 data/bf88.rda                 |  Bin 0 -> 4271 bytes
 data/bordeaux.rda             |  Bin 0 -> 280 bytes
 data/bsetal97.rda             |  Bin 0 -> 6955 bytes
 data/buech.rda                |  Bin 0 -> 3303 bytes
 data/butterfly.rda            |  Bin 0 -> 2153 bytes
 data/capitales.rda            |  Bin 0 -> 608370 bytes
 data/carni19.rda              |  Bin 0 -> 651 bytes
 data/carni70.rda              |  Bin 0 -> 1992 bytes
 data/carniherbi49.rda         |  Bin 0 -> 2934 bytes
 data/casitas.rda              |  Bin 0 -> 927 bytes
 data/chatcat.rda              |  Bin 0 -> 395 bytes
 data/chats.rda                |  Bin 0 -> 282 bytes
 data/chazeb.rda               |  Bin 0 -> 631 bytes
 data/chevaine.rda             |  Bin 0 -> 3618 bytes
 data/chickenk.rda             |  Bin 0 -> 18607 bytes
 data/clementines.rda          |  Bin 0 -> 1146 bytes
 data/cnc2003.rda              |  Bin 0 -> 3791 bytes
 data/coleo.rda                |  Bin 0 -> 3769 bytes
 data/corvus.rda               |  Bin 0 -> 585 bytes
 data/datalist                 |  108 ++
 data/deug.rda                 |  Bin 0 -> 2113 bytes
 data/doubs.rda                |  Bin 0 -> 2872 bytes
 data/dunedata.rda             |  Bin 0 -> 966 bytes
 data/ecg.rda                  |  Bin 0 -> 3644 bytes
 data/ecomor.rda               |  Bin 0 -> 7470 bytes
 data/elec88.rda               |  Bin 0 -> 368813 bytes
 data/escopage.rda             |  Bin 0 -> 1971 bytes
 data/euro123.rda              |  Bin 0 -> 1156 bytes
 data/fission.rda              |  Bin 0 -> 423 bytes
 data/friday87.rda             |  Bin 0 -> 1917 bytes
 data/fruits.rda               |  Bin 0 -> 1586 bytes
 data/ggtortoises.rda          |  Bin 0 -> 13845 bytes
 data/granulo.rda              |  Bin 0 -> 1107 bytes
 data/hdpg.rda                 |  Bin 0 -> 353916 bytes
 data/housetasks.rda           |  Bin 0 -> 388 bytes
 data/humDNAm.rda              |  Bin 0 -> 1479 bytes
 data/ichtyo.rda               |  Bin 0 -> 955 bytes
 data/irishdata.rda            |  Bin 0 -> 20874 bytes
 data/julliot.rda              |  Bin 0 -> 9042 bytes
 data/jv73.rda                 |  Bin 0 -> 5609 bytes
 data/kcponds.rda              |  Bin 0 -> 7379 bytes
 data/lascaux.rda              |  Bin 0 -> 27748 bytes
 data/lizards.rda              |  Bin 0 -> 883 bytes
 data/macaca.rda               |  Bin 0 -> 1003 bytes
 data/macon.rda                |  Bin 0 -> 447 bytes
 data/macroloire.rda           |  Bin 0 -> 3126 bytes
 data/mafragh.rda              |  Bin 0 -> 23386 bytes
 data/maples.rda               |  Bin 0 -> 2030 bytes
 data/mariages.rda             |  Bin 0 -> 337 bytes
 data/meau.rda                 |  Bin 0 -> 1324 bytes
 data/meaudret.rda             |  Bin 0 -> 1375 bytes
 data/microsatt.rda            |  Bin 0 -> 2607 bytes
 data/mjrochet.rda             |  Bin 0 -> 2384 bytes
 data/mollusc.rda              |  Bin 0 -> 2468 bytes
 data/monde84.rda              |  Bin 0 -> 1064 bytes
 data/morphosport.rda          |  Bin 0 -> 2116 bytes
 data/newick.eg.rda            |  Bin 0 -> 5277 bytes
 data/njplot.rda               |  Bin 0 -> 1046 bytes
 data/olympic.rda              |  Bin 0 -> 1397 bytes
 data/oribatid.rda             |  Bin 0 -> 3609 bytes
 data/ours.rda                 |  Bin 0 -> 539 bytes
 data/palm.rda                 |  Bin 0 -> 3447 bytes
 data/pap.rda                  |  Bin 0 -> 1394 bytes
 data/pcw.rda                  |  Bin 0 -> 800003 bytes
 data/perthi02.rda             |  Bin 0 -> 14530 bytes
 data/piosphere.rda            |  Bin 0 -> 49493 bytes
 data/presid2002.rda           |  Bin 0 -> 9313 bytes
 data/procella.rda             |  Bin 0 -> 1156 bytes
 data/rankrock.rda             |  Bin 0 -> 828 bytes
 data/rhizobium.rda            |  Bin 0 -> 7380 bytes
 data/rhone.rda                |  Bin 0 -> 2133 bytes
 data/rpjdl.rda                |  Bin 0 -> 4642 bytes
 data/santacatalina.rda        |  Bin 0 -> 532 bytes
 data/sarcelles.rda            |  Bin 0 -> 1236 bytes
 data/seconde.rda              |  Bin 0 -> 572 bytes
 data/skulls.rda               |  Bin 0 -> 1383 bytes
 data/steppe.rda               |  Bin 0 -> 4364 bytes
 data/syndicats.rda            |  Bin 0 -> 232 bytes
 data/t3012.rda                |  Bin 0 -> 43350 bytes
 data/tarentaise.rda           |  Bin 0 -> 8669 bytes
 data/taxo.eg.rda              |  Bin 0 -> 1094 bytes
 data/tintoodiel.rda           |  Bin 0 -> 4134 bytes
 data/tithonia.rda             |  Bin 0 -> 921 bytes
 data/tortues.rda              |  Bin 0 -> 573 bytes
 data/toxicity.rda             |  Bin 0 -> 1221 bytes
 data/trichometeo.rda          |  Bin 0 -> 2231 bytes
 data/ungulates.rda            |  Bin 0 -> 724 bytes
 data/vegtf.rda                |  Bin 0 -> 12400 bytes
 data/veuvage.rda              |  Bin 0 -> 1177 bytes
 data/westafrica.rda           |  Bin 0 -> 11316 bytes
 data/woangers.rda             |  Bin 0 -> 2969 bytes
 data/worksurv.rda             |  Bin 0 -> 1818 bytes
 data/yanomama.rda             |  Bin 0 -> 2099 bytes
 data/zealand.rda              |  Bin 0 -> 1207 bytes
 inst/CITATION                 |   53 +
 inst/pictures/atyacarto.pnm   |  Bin 0 -> 199644 bytes
 inst/pictures/atyadigi.pnm    |  Bin 0 -> 199644 bytes
 inst/pictures/avijonseau.pnm  |  Bin 0 -> 100091 bytes
 inst/pictures/avijonsrou.pnm  |  Bin 0 -> 100485 bytes
 inst/pictures/avijonsveg.pnm  |  Bin 0 -> 100091 bytes
 inst/pictures/avijonsvil.pnm  |  Bin 0 -> 100091 bytes
 inst/pictures/butterfly.pnm   |  Bin 0 -> 55515 bytes
 inst/pictures/capitales.pnm   |  Bin 0 -> 117451 bytes
 inst/pictures/fatala.pnm      |  Bin 0 -> 44527 bytes
 inst/pictures/france_sm00.pnm |  Bin 0 -> 396996 bytes
 inst/pictures/ireland.pnm     |  Bin 0 -> 62211 bytes
 inst/pictures/paris.pnm       |  Bin 0 -> 244735 bytes
 inst/pictures/sarcelles.pnm   |  Bin 0 -> 66902 bytes
 inst/pictures/tintoodiel.pnm  |  Bin 0 -> 416655 bytes
 man/EH.Rd                     |   33 +
 man/PI2newick.Rd              |   36 +
 man/RV.rtest.Rd               |   32 +
 man/RVdist.randtest.Rd        |   24 +
 man/abouheif.eg.Rd            |   43 +
 man/acacia.Rd                 |   39 +
 man/add.scatter.Rd            |  119 ++
 man/ade4-deprecated.Rd        |    9 +
 man/ade4-internal.Rd          |   21 +
 man/ade4.package.Rd           |   21 +
 man/adegraphicsLoaded.Rd      |   14 +
 man/aminoacyl.Rd              |   36 +
 man/amova.Rd                  |   47 +
 man/apis108.Rd                |   25 +
 man/apqe.Rd                   |   46 +
 man/aravo.Rd                  |   61 +
 man/ardeche.Rd                |   39 +
 man/area.plot.Rd              |  179 +++
 man/arrival.Rd                |   26 +
 man/as.taxo.Rd                |   40 +
 man/atlas.Rd                  |   86 ++
 man/atya.Rd                   |   37 +
 man/avijons.Rd                |   91 ++
 man/avimedi.Rd                |   61 +
 man/aviurba.Rd                |   41 +
 man/bacteria.Rd               |   37 +
 man/banque.Rd                 |  163 ++
 man/baran95.Rd                |   76 +
 man/bca.rlq.Rd                |   63 +
 man/between.Rd                |   87 ++
 man/betweencoinertia.Rd       |   62 +
 man/bf88.Rd                   |   46 +
 man/bicenter.wt.Rd            |   28 +
 man/bordeaux.Rd               |   23 +
 man/bsetal97.Rd               |   58 +
 man/buech.Rd                  |   48 +
 man/butterfly.Rd              |   52 +
 man/bwca.dpcoa.Rd             |   83 +
 man/cailliez.Rd               |   47 +
 man/capitales.Rd              |   57 +
 man/carni19.Rd                |   27 +
 man/carni70.Rd                |   43 +
 man/carniherbi49.Rd           |   40 +
 man/casitas.Rd                |   37 +
 man/chatcat.Rd                |   35 +
 man/chats.Rd                  |   46 +
 man/chazeb.Rd                 |   26 +
 man/chevaine.Rd               |   61 +
 man/chickenk.Rd               |   26 +
 man/clementines.Rd            |   56 +
 man/cnc2003.Rd                |   35 +
 man/coinertia.Rd              |   86 ++
 man/coleo.Rd                  |   49 +
 man/combine.4thcorner.Rd      |   77 +
 man/corkdist.Rd               |   59 +
 man/corvus.Rd                 |   38 +
 man/costatis.Rd               |   41 +
 man/costatis.randtest.Rd      |   34 +
 man/deug.Rd                   |   36 +
 man/disc.Rd                   |   42 +
 man/discrimin.Rd              |   54 +
 man/discrimin.coa.Rd          |   35 +
 man/dist.binary.Rd            |   49 +
 man/dist.dudi.Rd              |   29 +
 man/dist.genet.Rd             |   97 ++
 man/dist.ktab.Rd              |  157 ++
 man/dist.neig.Rd              |   28 +
 man/dist.prop.Rd              |   61 +
 man/dist.quant.Rd             |   53 +
 man/divc.Rd                   |   43 +
 man/divcmax.Rd                |   83 +
 man/dotchart.phylog.Rd        |   59 +
 man/dotcircle.Rd              |   29 +
 man/doubs.Rd                  |   88 ++
 man/dpcoa.Rd                  |   84 ++
 man/dudi.Rd                   |   79 +
 man/dudi.acm.Rd               |   91 ++
 man/dudi.coa.Rd               |   50 +
 man/dudi.dec.Rd               |   36 +
 man/dudi.fca.Rd               |   73 +
 man/dudi.hillsmith.Rd         |   53 +
 man/dudi.mix.Rd               |   60 +
 man/dudi.nsc.Rd               |   36 +
 man/dudi.pca.Rd               |   85 ++
 man/dudi.pco.Rd               |   56 +
 man/dunedata.Rd               |   26 +
 man/ecg.Rd                    |   43 +
 man/ecomor.Rd                 |   87 ++
 man/elec88.Rd                 |   75 +
 man/escopage.Rd               |   34 +
 man/euro123.Rd                |   44 +
 man/fission.Rd                |   26 +
 man/foucart.Rd                |   77 +
 man/fourthcorner.Rd           |  170 +++
 man/friday87.Rd               |   33 +
 man/fruits.Rd                 |   71 +
 man/fuzzygenet.Rd             |   46 +
 man/gearymoran.Rd             |   70 +
 man/genet.Rd                  |   76 +
 man/ggtortoises.Rd            |   53 +
 man/granulo.Rd                |   42 +
 man/gridrowcol.Rd             |   54 +
 man/hdpg.Rd                   |   74 +
 man/housetasks.Rd             |   29 +
 man/humDNAm.Rd                |   30 +
 man/ichtyo.Rd                 |   33 +
 man/inertia.dudi.Rd           |   56 +
 man/irishdata.Rd              |   72 +
 man/is.euclid.Rd              |   40 +
 man/julliot.Rd                |   96 ++
 man/jv73.Rd                   |   53 +
 man/kcponds.Rd                |   66 +
 man/kdist.Rd                  |   87 ++
 man/kdist2ktab.Rd             |   44 +
 man/kdisteuclid.Rd            |   61 +
 man/kplot.Rd                  |   20 +
 man/kplot.foucart.Rd          |   35 +
 man/kplot.mcoa.Rd             |   42 +
 man/kplot.mfa.Rd              |   37 +
 man/kplot.pta.Rd              |   47 +
 man/kplot.sepan.Rd            |   74 +
 man/kplot.statis.Rd           |   43 +
 man/krandtest.Rd              |   45 +
 man/ktab.Rd                   |   91 ++
 man/ktab.data.frame.Rd        |   39 +
 man/ktab.list.df.Rd           |   38 +
 man/ktab.list.dudi.Rd         |   53 +
 man/ktab.match2ktabs.Rd       |   41 +
 man/ktab.within.Rd            |   35 +
 man/lascaux.Rd                |   60 +
 man/lingoes.Rd                |   46 +
 man/lizards.Rd                |   41 +
 man/macaca.Rd                 |   41 +
 man/macon.Rd                  |   17 +
 man/macroloire.Rd             |   80 +
 man/mafragh.Rd                |  112 ++
 man/mantel.randtest.Rd        |   31 +
 man/mantel.rtest.Rd           |   34 +
 man/maples.Rd                 |   42 +
 man/mariages.Rd               |   43 +
 man/mbpcaiv.Rd                |   70 +
 man/mbpls.Rd                  |   68 +
 man/mcoa.Rd                   |   70 +
 man/mdpcoa.Rd                 |  156 ++
 man/meau.Rd                   |   58 +
 man/meaudret.Rd               |   58 +
 man/mfa.Rd                    |   69 +
 man/microsatt.Rd              |   49 +
 man/mjrochet.Rd               |   47 +
 man/mld.Rd                    |   63 +
 man/mollusc.Rd                |   46 +
 man/monde84.Rd                |   34 +
 man/morphosport.Rd            |   34 +
 man/mstree.Rd                 |   49 +
 man/multiblock.Rd             |   27 +
 man/multispati.Rd             |  181 +++
 man/multispati.randtest.Rd    |   46 +
 man/multispati.rtest.Rd       |   46 +
 man/neig.Rd                   |  147 ++
 man/newick.eg.Rd              |   42 +
 man/newick2phylog.Rd          |  113 ++
 man/niche.Rd                  |   98 ++
 man/nipals.Rd                 |  101 ++
 man/njplot.Rd                 |   32 +
 man/olympic.Rd                |   51 +
 man/optimEH.Rd                |   51 +
 man/oribatid.Rd               |   54 +
 man/originality.Rd            |   57 +
 man/orisaved.Rd               |   47 +
 man/orthobasis.Rd             |  148 ++
 man/orthogram.Rd              |  110 ++
 man/ours.Rd                   |   91 ++
 man/palm.Rd                   |   44 +
 man/pap.Rd                    |   30 +
 man/pcaiv.Rd                  |  147 ++
 man/pcaivortho.Rd             |   87 ++
 man/pcoscaled.Rd              |   33 +
 man/pcw.Rd                    |   51 +
 man/perthi02.Rd               |   27 +
 man/phylog.Rd                 |   73 +
 man/piosphere.Rd              |   38 +
 man/plot.between.Rd           |   64 +
 man/plot.phylog.Rd            |  123 ++
 man/plot.within.Rd            |   60 +
 man/presid2002.Rd             |   72 +
 man/procella.Rd               |   45 +
 man/procuste.Rd               |  105 ++
 man/procuste.randtest.Rd      |   34 +
 man/procuste.rtest.Rd         |   38 +
 man/pta.Rd                    |   68 +
 man/quasieuclid.Rd            |   34 +
 man/randEH.Rd                 |   54 +
 man/randboot.Rd               |   51 +
 man/randboot.multiblock.Rd    |   41 +
 man/randtest.Rd               |   59 +
 man/randtest.amova.Rd         |   34 +
 man/randtest.between.Rd       |   31 +
 man/randtest.coinertia.Rd     |   47 +
 man/randtest.discrimin.Rd     |   41 +
 man/randtest.dpcoa.Rd         |   45 +
 man/randtest.pcaiv.Rd         |   37 +
 man/randxval.Rd               |   54 +
 man/rankrock.Rd               |   22 +
 man/reconst.Rd                |   58 +
 man/rhizobium.Rd              |   78 +
 man/rhone.Rd                  |   38 +
 man/rlq.Rd                    |  104 ++
 man/rpjdl.Rd                  |   53 +
 man/rtest.Rd                  |   28 +
 man/rtest.between.Rd          |   31 +
 man/rtest.discrimin.Rd        |   41 +
 man/s.arrow.Rd                |   46 +
 man/s.chull.Rd                |   56 +
 man/s.class.Rd                |   85 ++
 man/s.corcircle.Rd            |   45 +
 man/s.distri.Rd               |   72 +
 man/s.hist.Rd                 |   33 +
 man/s.image.Rd                |   80 +
 man/s.kde2d.Rd                |   68 +
 man/s.label.Rd                |   73 +
 man/s.logo.Rd                 |   65 +
 man/s.match.Rd                |   58 +
 man/s.match.class.Rd          |   97 ++
 man/s.multinom.Rd             |   77 +
 man/s.traject.Rd              |   58 +
 man/s.value.Rd                |   73 +
 man/santacatalina.Rd          |   36 +
 man/sarcelles.Rd              |   41 +
 man/scalewt.Rd                |   57 +
 man/scatter.Rd                |   45 +
 man/scatter.acm.Rd            |   31 +
 man/scatter.coa.Rd            |   48 +
 man/scatter.dudi.Rd           |   43 +
 man/scatter.fca.Rd            |   40 +
 man/scatterutil.Rd            |   94 ++
 man/sco.boxplot.Rd            |   45 +
 man/sco.class.Rd              |   53 +
 man/sco.distri.Rd             |   67 +
 man/sco.gauss.Rd              |   52 +
 man/sco.label.Rd              |   48 +
 man/sco.match.Rd              |   49 +
 man/sco.quant.Rd              |   30 +
 man/score.Rd                  |   39 +
 man/score.acm.Rd              |   28 +
 man/score.coa.Rd              |   62 +
 man/score.mix.Rd              |   26 +
 man/score.pca.Rd              |   32 +
 man/seconde.Rd                |   31 +
 man/sepan.Rd                  |   55 +
 man/skulls.Rd                 |   40 +
 man/statico.Rd                |   45 +
 man/statico.krandtest.Rd      |   41 +
 man/statis.Rd                 |   71 +
 man/steppe.Rd                 |   35 +
 man/supcol.Rd                 |   49 +
 man/supdist.Rd                |   86 ++
 man/suprow.Rd                 |   80 +
 man/symbols.phylog.Rd         |   41 +
 man/syndicats.Rd              |   26 +
 man/t3012.Rd                  |   34 +
 man/table.cont.Rd             |   54 +
 man/table.dist.Rd             |   26 +
 man/table.paint.Rd            |   43 +
 man/table.phylog.Rd           |   48 +
 man/table.value.Rd            |   42 +
 man/tarentaise.Rd             |   50 +
 man/taxo.eg.Rd                |   39 +
 man/testdim.Rd                |   52 +
 man/testdim.multiblock.Rd     |   45 +
 man/tintoodiel.Rd             |   41 +
 man/tithonia.Rd               |   44 +
 man/tortues.Rd                |   29 +
 man/toxicity.Rd               |   35 +
 man/triangle.class.Rd         |   59 +
 man/triangle.plot.Rd          |   76 +
 man/trichometeo.Rd            |   44 +
 man/ungulates.Rd              |   45 +
 man/uniquewt.df.Rd            |   32 +
 man/variance.phylog.Rd        |   48 +
 man/varipart.Rd               |   77 +
 man/vegtf.Rd                  |   48 +
 man/veuvage.Rd                |   32 +
 man/wca.rlq.Rd                |   62 +
 man/westafrica.Rd             |  103 ++
 man/within.Rd                 |   85 ++
 man/withincoinertia.Rd        |   65 +
 man/withinpca.Rd              |   50 +
 man/witwit.coa.Rd             |   67 +
 man/woangers.Rd               |   98 ++
 man/worksurv.Rd               |   85 ++
 man/yanomama.Rd               |   42 +
 man/zealand.Rd                |   52 +
 src/Makevars                  |    2 +
 src/adesub.c                  | 1443 ++++++++++++++++++
 src/adesub.h                  |   53 +
 src/divsub.c                  |  735 +++++++++
 src/divsub.h                  |   23 +
 src/fourthcorner.c            | 2171 ++++++++++++++++++++++++++
 src/init.c                    |   52 +
 src/phylog.c                  |  291 ++++
 src/testamova.c               |  432 ++++++
 src/testdim.c                 |  297 ++++
 src/testrlq.c                 |  321 ++++
 src/tests.c                   | 1179 +++++++++++++++
 619 files changed, 49805 insertions(+)

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/r-cran-ade4.git



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